Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 CYP2T3P-201ENST00000601990 817 ntBASIC18.9■□□□□ 0.62
RTL4Q6ZR62 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RTL4Q6ZR62 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.89■□□□□ 0.61
RTL4Q6ZR62 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.89■□□□□ 0.61
RTL4Q6ZR62 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RTL4Q6ZR62 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 AL355472.2-201ENST00000422958 438 ntBASIC18.88■□□□□ 0.61
RTL4Q6ZR62 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 CD99P1-205ENST00000527459 561 ntBASIC18.88■□□□□ 0.61
RTL4Q6ZR62 KRT18P6-201ENST00000555540 1265 ntBASIC18.88■□□□□ 0.61
RTL4Q6ZR62 AL589743.5-201ENST00000616611 1050 ntBASIC18.88■□□□□ 0.61
RTL4Q6ZR62 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 LINC01006-201ENST00000333319 2292 ntBASIC18.88■□□□□ 0.61
RTL4Q6ZR62 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL4Q6ZR62 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 AC097658.1-201ENST00000475555 843 ntBASIC18.87■□□□□ 0.61
RTL4Q6ZR62 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL4Q6ZR62 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL4Q6ZR62 PLK5-205ENST00000642079 1969 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms