Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM88Q6PEY1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 AC099398.1-201ENST00000567919 2776 ntBASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88Q6PEY1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TMEM88Q6PEY1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TMEM88Q6PEY1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM88Q6PEY1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.27■□□□□ 0.19
TMEM88Q6PEY1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 HCG11-201ENST00000411553 5696 ntBASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88Q6PEY1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 AC139713.2-201ENST00000641328 2723 ntBASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 TCF3P1-201ENST00000423021 1937 ntBASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 CA15P2-201ENST00000611168 834 ntBASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88Q6PEY1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms