Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 AL354811.1-201ENST00000610286 706 ntBASIC19.4■□□□□ 0.7
RNF220Q5VTB9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF220Q5VTB9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF220Q5VTB9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF220Q5VTB9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.39■□□□□ 0.7
RNF220Q5VTB9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RNF220Q5VTB9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF220Q5VTB9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF220Q5VTB9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF220Q5VTB9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RNF220Q5VTB9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF220Q5VTB9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF220Q5VTB9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF220Q5VTB9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF220Q5VTB9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF220Q5VTB9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF220Q5VTB9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF220Q5VTB9 AC099778.1-201ENST00000568593 1911 ntBASIC19.39■□□□□ 0.69
RNF220Q5VTB9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF220Q5VTB9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 AC142381.2-201ENST00000566120 298 ntBASIC19.38■□□□□ 0.69
RNF220Q5VTB9 AL512408.1-201ENST00000569378 2000 ntBASIC19.38■□□□□ 0.69
RNF220Q5VTB9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 AL162377.1-201ENST00000618844 1793 ntBASIC19.38■□□□□ 0.69
RNF220Q5VTB9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 AC093503.3-201ENST00000624917 2352 ntBASIC19.38■□□□□ 0.69
RNF220Q5VTB9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RNF220Q5VTB9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF220Q5VTB9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 AL049812.1-201ENST00000432563 2267 ntBASIC19.36■□□□□ 0.69
RNF220Q5VTB9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 PLK5-205ENST00000642079 1969 ntBASIC19.36■□□□□ 0.69
RNF220Q5VTB9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 AL358852.1-201ENST00000623174 1268 ntBASIC19.36■□□□□ 0.69
RNF220Q5VTB9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF220Q5VTB9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms