Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH17Q12864 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDH17Q12864 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH17Q12864 MCRIP2P1-201ENST00000394346 511 ntBASIC20.44■□□□□ 0.86
CDH17Q12864 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH17Q12864 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.44■□□□□ 0.86
CDH17Q12864 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH17Q12864 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH17Q12864 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CDH17Q12864 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH17Q12864 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH17Q12864 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH17Q12864 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDH17Q12864 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH17Q12864 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH17Q12864 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH17Q12864 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH17Q12864 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH17Q12864 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH17Q12864 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH17Q12864 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH17Q12864 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH17Q12864 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.43■□□□□ 0.86
CDH17Q12864 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH17Q12864 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH17Q12864 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDH17Q12864 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH17Q12864 AC007322.1-201ENST00000426983 750 ntBASIC20.43■□□□□ 0.86
CDH17Q12864 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH17Q12864 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.43■□□□□ 0.86
CDH17Q12864 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
CDH17Q12864 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CDH17Q12864 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CDH17Q12864 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH17Q12864 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH17Q12864 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH17Q12864 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH17Q12864 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.43■□□□□ 0.86
CDH17Q12864 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.43■□□□□ 0.86
CDH17Q12864 PCDHAC2-203ENST00000615316 3011 ntBASIC20.43■□□□□ 0.86
CDH17Q12864 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH17Q12864 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CDH17Q12864 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH17Q12864 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH17Q12864 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH17Q12864 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH17Q12864 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH17Q12864 CYP2T1P-201ENST00000432607 1285 ntBASIC20.42■□□□□ 0.86
CDH17Q12864 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.42■□□□□ 0.86
CDH17Q12864 AC069236.1-201ENST00000604339 616 ntBASIC20.42■□□□□ 0.86
CDH17Q12864 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH17Q12864 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.42■□□□□ 0.86
CDH17Q12864 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH17Q12864 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CDH17Q12864 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH17Q12864 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH17Q12864 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH17Q12864 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
CDH17Q12864 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.42■□□□□ 0.86
CDH17Q12864 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH17Q12864 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH17Q12864 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH17Q12864 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH17Q12864 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH17Q12864 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
CDH17Q12864 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH17Q12864 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH17Q12864 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH17Q12864 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.41■□□□□ 0.86
CDH17Q12864 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.41■□□□□ 0.86
CDH17Q12864 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.41■□□□□ 0.86
CDH17Q12864 AC008694.1-202ENST00000636953 945 ntBASIC20.41■□□□□ 0.86
CDH17Q12864 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CDH17Q12864 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH17Q12864 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH17Q12864 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH17Q12864 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH17Q12864 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CDH17Q12864 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH17Q12864 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH17Q12864 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH17Q12864 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CDH17Q12864 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDH17Q12864 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CDH17Q12864 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH17Q12864 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH17Q12864 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.4■□□□□ 0.86
CDH17Q12864 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.4■□□□□ 0.86
CDH17Q12864 TCF3P1-201ENST00000423021 1937 ntBASIC20.4■□□□□ 0.86
CDH17Q12864 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.4■□□□□ 0.86
CDH17Q12864 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH17Q12864 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CDH17Q12864 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.4■□□□□ 0.86
CDH17Q12864 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CDH17Q12864 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.4■□□□□ 0.86
CDH17Q12864 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CDH17Q12864 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CDH17Q12864 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDH17Q12864 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CDH17Q12864 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms