Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.74■□□□□ 0.75
YBX1P67809 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
YBX1P67809 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.74■□□□□ 0.75
YBX1P67809 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
YBX1P67809 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.74■□□□□ 0.75
YBX1P67809 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
YBX1P67809 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.73■□□□□ 0.75
YBX1P67809 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
YBX1P67809 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.73■□□□□ 0.75
YBX1P67809 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
YBX1P67809 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.73■□□□□ 0.75
YBX1P67809 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.73■□□□□ 0.75
YBX1P67809 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.73■□□□□ 0.75
YBX1P67809 AL162377.1-201ENST00000618844 1793 ntBASIC19.73■□□□□ 0.75
YBX1P67809 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
YBX1P67809 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
YBX1P67809 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
YBX1P67809 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
YBX1P67809 AL512625.2-201ENST00000417533 625 ntBASIC19.73■□□□□ 0.75
YBX1P67809 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
YBX1P67809 AL138781.1-201ENST00000566567 1274 ntBASIC19.73■□□□□ 0.75
YBX1P67809 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.73■□□□□ 0.75
YBX1P67809 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
YBX1P67809 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
YBX1P67809 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
YBX1P67809 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
YBX1P67809 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
YBX1P67809 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
YBX1P67809 KRT17P1-201ENST00000399211 1546 ntBASIC19.72■□□□□ 0.75
YBX1P67809 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
YBX1P67809 MKRN4P-201ENST00000444706 1521 ntBASIC19.72■□□□□ 0.75
YBX1P67809 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.72■□□□□ 0.75
YBX1P67809 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
YBX1P67809 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
YBX1P67809 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.72■□□□□ 0.75
YBX1P67809 ID1-201ENST00000376105 1233 ntBASIC19.72■□□□□ 0.75
YBX1P67809 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.72■□□□□ 0.75
YBX1P67809 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
YBX1P67809 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.72■□□□□ 0.75
YBX1P67809 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
YBX1P67809 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.72■□□□□ 0.75
YBX1P67809 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
YBX1P67809 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.72■□□□□ 0.75
YBX1P67809 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
YBX1P67809 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
YBX1P67809 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YBX1P67809 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YBX1P67809 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YBX1P67809 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
YBX1P67809 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.71■□□□□ 0.75
YBX1P67809 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YBX1P67809 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
YBX1P67809 AC098934.4-201ENST00000564127 592 ntBASIC19.71■□□□□ 0.75
YBX1P67809 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.71■□□□□ 0.75
YBX1P67809 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YBX1P67809 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YBX1P67809 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
YBX1P67809 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YBX1P67809 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
YBX1P67809 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YBX1P67809 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YBX1P67809 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.71■□□□□ 0.75
YBX1P67809 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
YBX1P67809 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
YBX1P67809 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.7■□□□□ 0.74
YBX1P67809 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YBX1P67809 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YBX1P67809 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.7■□□□□ 0.74
YBX1P67809 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
YBX1P67809 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
YBX1P67809 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.7■□□□□ 0.74
YBX1P67809 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YBX1P67809 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.7■□□□□ 0.74
YBX1P67809 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
YBX1P67809 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.7■□□□□ 0.74
YBX1P67809 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YBX1P67809 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.69■□□□□ 0.74
YBX1P67809 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YBX1P67809 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YBX1P67809 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YBX1P67809 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YBX1P67809 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
YBX1P67809 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YBX1P67809 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YBX1P67809 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YBX1P67809 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.69■□□□□ 0.74
YBX1P67809 MIPEPP3-201ENST00000412105 444 ntBASIC19.69■□□□□ 0.74
YBX1P67809 BX276092.2-201ENST00000417668 665 ntBASIC19.69■□□□□ 0.74
YBX1P67809 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.69■□□□□ 0.74
YBX1P67809 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.69■□□□□ 0.74
YBX1P67809 CYP2T3P-201ENST00000601990 817 ntBASIC19.69■□□□□ 0.74
YBX1P67809 MIR2861-201ENST00000636310 90 ntBASIC19.69■□□□□ 0.74
YBX1P67809 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.69■□□□□ 0.74
YBX1P67809 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YBX1P67809 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
YBX1P67809 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YBX1P67809 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
YBX1P67809 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YBX1P67809 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YBX1P67809 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms