Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.41■□□□□ 0.54
CXCR4P61073 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CXCR4P61073 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CXCR4P61073 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CXCR4P61073 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CXCR4P61073 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.41■□□□□ 0.54
CXCR4P61073 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CXCR4P61073 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CXCR4P61073 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCR4P61073 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCR4P61073 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCR4P61073 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCR4P61073 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCR4P61073 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCR4P61073 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CXCR4P61073 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.4■□□□□ 0.54
CXCR4P61073 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CXCR4P61073 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CXCR4P61073 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCR4P61073 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CXCR4P61073 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCR4P61073 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCR4P61073 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.4■□□□□ 0.54
CXCR4P61073 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCR4P61073 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCR4P61073 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCR4P61073 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.39■□□□□ 0.54
CXCR4P61073 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CXCR4P61073 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCR4P61073 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CXCR4P61073 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CXCR4P61073 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCR4P61073 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CXCR4P61073 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCR4P61073 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.39■□□□□ 0.53
CXCR4P61073 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCR4P61073 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CXCR4P61073 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCR4P61073 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.39■□□□□ 0.53
CXCR4P61073 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.39■□□□□ 0.53
CXCR4P61073 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.39■□□□□ 0.53
CXCR4P61073 MIR2861-201ENST00000636310 90 ntBASIC18.39■□□□□ 0.53
CXCR4P61073 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.39■□□□□ 0.53
CXCR4P61073 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
CXCR4P61073 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.39■□□□□ 0.53
CXCR4P61073 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CXCR4P61073 TSPY26P-201ENST00000476365 1326 ntBASIC18.39■□□□□ 0.53
CXCR4P61073 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCR4P61073 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCR4P61073 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCR4P61073 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCR4P61073 AL691432.2-201ENST00000607222 2038 ntBASIC18.39■□□□□ 0.53
CXCR4P61073 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCR4P61073 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CXCR4P61073 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCR4P61073 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCR4P61073 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCR4P61073 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCR4P61073 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCR4P61073 AC099791.1-201ENST00000416440 715 ntBASIC18.38■□□□□ 0.53
CXCR4P61073 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.38■□□□□ 0.53
CXCR4P61073 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.38■□□□□ 0.53
CXCR4P61073 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.38■□□□□ 0.53
CXCR4P61073 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CXCR4P61073 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CXCR4P61073 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCR4P61073 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCR4P61073 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.38■□□□□ 0.53
CXCR4P61073 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCR4P61073 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CXCR4P61073 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCR4P61073 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.37■□□□□ 0.53
CXCR4P61073 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CXCR4P61073 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CXCR4P61073 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.37■□□□□ 0.53
CXCR4P61073 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CXCR4P61073 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.37■□□□□ 0.53
CXCR4P61073 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.37■□□□□ 0.53
CXCR4P61073 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.37■□□□□ 0.53
CXCR4P61073 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.37■□□□□ 0.53
CXCR4P61073 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CXCR4P61073 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.37■□□□□ 0.53
CXCR4P61073 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CXCR4P61073 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.37■□□□□ 0.53
CXCR4P61073 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.37■□□□□ 0.53
CXCR4P61073 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms