Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3EP60228 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
EIF3EP60228 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.85■□□□□ 0.93
EIF3EP60228 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.85■□□□□ 0.93
EIF3EP60228 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3EP60228 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3EP60228 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.85■□□□□ 0.93
EIF3EP60228 PGM5P4-201ENST00000421970 445 ntBASIC20.85■□□□□ 0.93
EIF3EP60228 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.85■□□□□ 0.93
EIF3EP60228 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.85■□□□□ 0.93
EIF3EP60228 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.85■□□□□ 0.93
EIF3EP60228 AC016405.3-201ENST00000607710 860 ntBASIC20.85■□□□□ 0.93
EIF3EP60228 AL356652.1-201ENST00000615962 565 ntBASIC20.85■□□□□ 0.93
EIF3EP60228 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
EIF3EP60228 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3EP60228 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3EP60228 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.85■□□□□ 0.93
EIF3EP60228 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
EIF3EP60228 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3EP60228 AC087633.2-202ENST00000565166 1439 ntBASIC20.85■□□□□ 0.93
EIF3EP60228 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3EP60228 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3EP60228 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.85■□□□□ 0.93
EIF3EP60228 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
EIF3EP60228 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3EP60228 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3EP60228 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3EP60228 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
EIF3EP60228 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3EP60228 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.84■□□□□ 0.93
EIF3EP60228 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3EP60228 AC007322.4-201ENST00000509611 723 ntBASIC20.84■□□□□ 0.93
EIF3EP60228 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3EP60228 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.84■□□□□ 0.93
EIF3EP60228 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
EIF3EP60228 MFSD11-216ENST00000590393 1141 ntBASIC20.84■□□□□ 0.93
EIF3EP60228 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
EIF3EP60228 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3EP60228 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3EP60228 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EIF3EP60228 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EIF3EP60228 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
EIF3EP60228 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.83■□□□□ 0.93
EIF3EP60228 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
EIF3EP60228 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EIF3EP60228 CYP21A1P-202ENST00000354927 1481 ntBASIC20.83■□□□□ 0.93
EIF3EP60228 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.83■□□□□ 0.93
EIF3EP60228 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EIF3EP60228 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EIF3EP60228 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
EIF3EP60228 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.83■□□□□ 0.93
EIF3EP60228 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.83■□□□□ 0.93
EIF3EP60228 AC026271.2-201ENST00000428091 497 ntBASIC20.83■□□□□ 0.93
EIF3EP60228 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.83■□□□□ 0.93
EIF3EP60228 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.83■□□□□ 0.93
EIF3EP60228 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
EIF3EP60228 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
EIF3EP60228 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
EIF3EP60228 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
EIF3EP60228 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
EIF3EP60228 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
EIF3EP60228 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.82■□□□□ 0.92
EIF3EP60228 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.82■□□□□ 0.92
EIF3EP60228 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
EIF3EP60228 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EIF3EP60228 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EIF3EP60228 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
EIF3EP60228 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
EIF3EP60228 AC016769.1-201ENST00000409132 1010 ntBASIC20.82■□□□□ 0.92
EIF3EP60228 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.82■□□□□ 0.92
EIF3EP60228 AL162412.1-201ENST00000567129 965 ntBASIC20.82■□□□□ 0.92
EIF3EP60228 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.82■□□□□ 0.92
EIF3EP60228 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
EIF3EP60228 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EIF3EP60228 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EIF3EP60228 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EIF3EP60228 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
EIF3EP60228 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.82■□□□□ 0.92
EIF3EP60228 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
EIF3EP60228 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3EP60228 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
EIF3EP60228 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3EP60228 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.81■□□□□ 0.92
EIF3EP60228 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3EP60228 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3EP60228 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3EP60228 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
EIF3EP60228 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3EP60228 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.81■□□□□ 0.92
EIF3EP60228 RARRES2P6-201ENST00000567333 442 ntBASIC20.81■□□□□ 0.92
EIF3EP60228 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.81■□□□□ 0.92
EIF3EP60228 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3EP60228 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3EP60228 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3EP60228 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3EP60228 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3EP60228 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.81■□□□□ 0.92
EIF3EP60228 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3EP60228 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.81■□□□□ 0.92
EIF3EP60228 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms