Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLNS1AP54105 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.05■□□□□ 0.8
CLNS1AP54105 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLNS1AP54105 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLNS1AP54105 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLNS1AP54105 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLNS1AP54105 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLNS1AP54105 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLNS1AP54105 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLNS1AP54105 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLNS1AP54105 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLNS1AP54105 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLNS1AP54105 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.04■□□□□ 0.8
CLNS1AP54105 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLNS1AP54105 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLNS1AP54105 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CLNS1AP54105 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.04■□□□□ 0.8
CLNS1AP54105 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CLNS1AP54105 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.04■□□□□ 0.8
CLNS1AP54105 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLNS1AP54105 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLNS1AP54105 UNC93B3-201ENST00000308076 687 ntBASIC20.04■□□□□ 0.8
CLNS1AP54105 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLNS1AP54105 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CLNS1AP54105 IGHV3-19-201ENST00000521488 291 ntBASIC20.04■□□□□ 0.8
CLNS1AP54105 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.04■□□□□ 0.8
CLNS1AP54105 AC126544.1-201ENST00000580842 1059 ntBASIC20.04■□□□□ 0.8
CLNS1AP54105 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.04■□□□□ 0.8
CLNS1AP54105 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.04■□□□□ 0.8
CLNS1AP54105 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CLNS1AP54105 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLNS1AP54105 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.04■□□□□ 0.8
CLNS1AP54105 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLNS1AP54105 AC007613.1-201ENST00000572811 2597 ntBASIC20.04■□□□□ 0.8
CLNS1AP54105 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLNS1AP54105 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLNS1AP54105 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.04■□□□□ 0.8
CLNS1AP54105 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLNS1AP54105 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.03■□□□□ 0.8
CLNS1AP54105 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CLNS1AP54105 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLNS1AP54105 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.03■□□□□ 0.8
CLNS1AP54105 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLNS1AP54105 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.03■□□□□ 0.8
CLNS1AP54105 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLNS1AP54105 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CLNS1AP54105 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLNS1AP54105 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLNS1AP54105 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.03■□□□□ 0.8
CLNS1AP54105 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.03■□□□□ 0.8
CLNS1AP54105 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.03■□□□□ 0.8
CLNS1AP54105 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CLNS1AP54105 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLNS1AP54105 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLNS1AP54105 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLNS1AP54105 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLNS1AP54105 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.02■□□□□ 0.8
CLNS1AP54105 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLNS1AP54105 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLNS1AP54105 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLNS1AP54105 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLNS1AP54105 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CLNS1AP54105 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLNS1AP54105 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CLNS1AP54105 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLNS1AP54105 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLNS1AP54105 HCG11-201ENST00000411553 5696 ntBASIC20.01■□□□□ 0.79
CLNS1AP54105 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.01■□□□□ 0.79
CLNS1AP54105 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.01■□□□□ 0.79
CLNS1AP54105 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLNS1AP54105 AC112907.3-201ENST00000577781 2400 ntBASIC20.01■□□□□ 0.79
CLNS1AP54105 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLNS1AP54105 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLNS1AP54105 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLNS1AP54105 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.01■□□□□ 0.79
CLNS1AP54105 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.01■□□□□ 0.79
CLNS1AP54105 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.01■□□□□ 0.79
CLNS1AP54105 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLNS1AP54105 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
CLNS1AP54105 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLNS1AP54105 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLNS1AP54105 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLNS1AP54105 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CLNS1AP54105 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20■□□□□ 0.79
CLNS1AP54105 AC024257.2-201ENST00000549699 147 ntBASIC20■□□□□ 0.79
CLNS1AP54105 AL136162.1-201ENST00000607711 1078 ntBASIC20■□□□□ 0.79
CLNS1AP54105 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CLNS1AP54105 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLNS1AP54105 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLNS1AP54105 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20■□□□□ 0.79
CLNS1AP54105 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CLNS1AP54105 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CLNS1AP54105 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLNS1AP54105 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLNS1AP54105 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLNS1AP54105 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CLNS1AP54105 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLNS1AP54105 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.99■□□□□ 0.79
CLNS1AP54105 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.99■□□□□ 0.79
CLNS1AP54105 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms