Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.27■□□□□ 0.84
ARCN1P48444 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.27■□□□□ 0.84
ARCN1P48444 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARCN1P48444 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.27■□□□□ 0.84
ARCN1P48444 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARCN1P48444 AL356652.1-201ENST00000615962 565 ntBASIC20.27■□□□□ 0.84
ARCN1P48444 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ARCN1P48444 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARCN1P48444 TCF3P1-201ENST00000423021 1937 ntBASIC20.27■□□□□ 0.84
ARCN1P48444 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARCN1P48444 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARCN1P48444 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
ARCN1P48444 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ARCN1P48444 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.27■□□□□ 0.83
ARCN1P48444 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
ARCN1P48444 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARCN1P48444 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARCN1P48444 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ARCN1P48444 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARCN1P48444 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ARCN1P48444 DPP3P2-201ENST00000416030 1696 ntBASIC20.26■□□□□ 0.83
ARCN1P48444 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARCN1P48444 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARCN1P48444 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.26■□□□□ 0.83
ARCN1P48444 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARCN1P48444 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ARCN1P48444 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.26■□□□□ 0.83
ARCN1P48444 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARCN1P48444 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ARCN1P48444 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ARCN1P48444 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ARCN1P48444 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARCN1P48444 HLA-L-209ENST00000420110 1011 ntBASIC20.26■□□□□ 0.83
ARCN1P48444 RARRES2P4-201ENST00000514074 484 ntBASIC20.26■□□□□ 0.83
ARCN1P48444 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARCN1P48444 AC005181.1-201ENST00000604782 1256 ntBASIC20.26■□□□□ 0.83
ARCN1P48444 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.26■□□□□ 0.83
ARCN1P48444 AL050303.2-201ENST00000619798 666 ntBASIC20.26■□□□□ 0.83
ARCN1P48444 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
ARCN1P48444 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.26■□□□□ 0.83
ARCN1P48444 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.26■□□□□ 0.83
ARCN1P48444 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ARCN1P48444 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARCN1P48444 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ARCN1P48444 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ARCN1P48444 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.25■□□□□ 0.83
ARCN1P48444 AFG3L1P-217ENST00000557444 2447 ntBASIC20.25■□□□□ 0.83
ARCN1P48444 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ARCN1P48444 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.25■□□□□ 0.83
ARCN1P48444 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.25■□□□□ 0.83
ARCN1P48444 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.25■□□□□ 0.83
ARCN1P48444 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARCN1P48444 ID1-201ENST00000376105 1233 ntBASIC20.25■□□□□ 0.83
ARCN1P48444 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.25■□□□□ 0.83
ARCN1P48444 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ARCN1P48444 AC231657.2-201ENST00000624556 255 ntBASIC20.25■□□□□ 0.83
ARCN1P48444 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARCN1P48444 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARCN1P48444 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARCN1P48444 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARCN1P48444 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ARCN1P48444 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.24■□□□□ 0.83
ARCN1P48444 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.24■□□□□ 0.83
ARCN1P48444 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ARCN1P48444 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARCN1P48444 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARCN1P48444 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARCN1P48444 PGM5P4-201ENST00000421970 445 ntBASIC20.24■□□□□ 0.83
ARCN1P48444 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.24■□□□□ 0.83
ARCN1P48444 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.24■□□□□ 0.83
ARCN1P48444 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARCN1P48444 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
ARCN1P48444 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARCN1P48444 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARCN1P48444 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
ARCN1P48444 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARCN1P48444 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARCN1P48444 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
ARCN1P48444 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARCN1P48444 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.23■□□□□ 0.83
ARCN1P48444 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARCN1P48444 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.23■□□□□ 0.83
ARCN1P48444 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARCN1P48444 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.23■□□□□ 0.83
ARCN1P48444 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARCN1P48444 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.23■□□□□ 0.83
ARCN1P48444 AC100791.3-201ENST00000617619 330 ntBASIC20.23■□□□□ 0.83
ARCN1P48444 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARCN1P48444 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
ARCN1P48444 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARCN1P48444 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ARCN1P48444 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.23■□□□□ 0.83
ARCN1P48444 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.23■□□□□ 0.83
ARCN1P48444 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.22■□□□□ 0.83
ARCN1P48444 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARCN1P48444 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARCN1P48444 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARCN1P48444 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARCN1P48444 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARCN1P48444 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms