Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RFC3P40938 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC3P40938 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC3P40938 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.5■□□□□ 0.55
RFC3P40938 AC006557.6-201ENST00000623071 864 ntBASIC18.5■□□□□ 0.55
RFC3P40938 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.5■□□□□ 0.55
RFC3P40938 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFC3P40938 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC3P40938 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFC3P40938 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFC3P40938 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.5■□□□□ 0.55
RFC3P40938 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFC3P40938 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RFC3P40938 FEM1AP4-201ENST00000443167 1987 ntBASIC18.5■□□□□ 0.55
RFC3P40938 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFC3P40938 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RFC3P40938 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RFC3P40938 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.49■□□□□ 0.55
RFC3P40938 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC3P40938 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.49■□□□□ 0.55
RFC3P40938 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.49■□□□□ 0.55
RFC3P40938 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.49■□□□□ 0.55
RFC3P40938 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RFC3P40938 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC3P40938 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFC3P40938 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.49■□□□□ 0.55
RFC3P40938 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RFC3P40938 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC3P40938 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC3P40938 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC3P40938 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC3P40938 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RFC3P40938 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFC3P40938 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFC3P40938 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC3P40938 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC3P40938 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC3P40938 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC3P40938 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.49■□□□□ 0.55
RFC3P40938 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFC3P40938 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFC3P40938 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFC3P40938 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFC3P40938 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFC3P40938 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFC3P40938 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFC3P40938 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFC3P40938 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
RFC3P40938 KRT17P3-201ENST00000420566 1262 ntBASIC18.48■□□□□ 0.55
RFC3P40938 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.48■□□□□ 0.55
RFC3P40938 C1QBPP2-201ENST00000528754 825 ntBASIC18.48■□□□□ 0.55
RFC3P40938 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.48■□□□□ 0.55
RFC3P40938 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.48■□□□□ 0.55
RFC3P40938 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFC3P40938 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.48■□□□□ 0.55
RFC3P40938 AC073130.3-201ENST00000624389 2278 ntBASIC18.48■□□□□ 0.55
RFC3P40938 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RFC3P40938 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RFC3P40938 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.48■□□□□ 0.55
RFC3P40938 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFC3P40938 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RFC3P40938 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC3P40938 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC3P40938 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFC3P40938 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC3P40938 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFC3P40938 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC3P40938 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC3P40938 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.47■□□□□ 0.55
RFC3P40938 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.47■□□□□ 0.55
RFC3P40938 AC121338.2-201ENST00000622535 1744 ntBASIC18.47■□□□□ 0.55
RFC3P40938 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.47■□□□□ 0.55
RFC3P40938 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC3P40938 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC3P40938 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RFC3P40938 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RFC3P40938 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC3P40938 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.47■□□□□ 0.55
RFC3P40938 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC3P40938 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
RFC3P40938 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
RFC3P40938 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RFC3P40938 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC3P40938 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC3P40938 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
RFC3P40938 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC3P40938 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC3P40938 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RFC3P40938 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC3P40938 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RFC3P40938 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC3P40938 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC3P40938 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFC3P40938 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RFC3P40938 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.46■□□□□ 0.55
RFC3P40938 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.46■□□□□ 0.55
RFC3P40938 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RFC3P40938 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
RFC3P40938 FAM197Y4-202ENST00000622692 608 ntBASIC18.46■□□□□ 0.55
RFC3P40938 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms