Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A4P31645 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A4P31645 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC6A4P31645 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A4P31645 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A4P31645 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A4P31645 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A4P31645 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A4P31645 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC6A4P31645 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A4P31645 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A4P31645 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.79■□□□□ 0.92
SLC6A4P31645 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.79■□□□□ 0.92
SLC6A4P31645 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SLC6A4P31645 AC008687.6-201ENST00000596318 630 ntBASIC20.79■□□□□ 0.92
SLC6A4P31645 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SLC6A4P31645 AC073648.6-201ENST00000641589 218 ntBASIC20.79■□□□□ 0.92
SLC6A4P31645 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC6A4P31645 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A4P31645 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SLC6A4P31645 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC6A4P31645 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SLC6A4P31645 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC6A4P31645 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A4P31645 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A4P31645 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A4P31645 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A4P31645 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A4P31645 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC6A4P31645 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A4P31645 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC6A4P31645 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A4P31645 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A4P31645 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A4P31645 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A4P31645 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A4P31645 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A4P31645 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC6A4P31645 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.78■□□□□ 0.92
SLC6A4P31645 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC6A4P31645 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SLC6A4P31645 AC233263.1-201ENST00000578059 224 ntBASIC20.78■□□□□ 0.92
SLC6A4P31645 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A4P31645 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SLC6A4P31645 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A4P31645 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC6A4P31645 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A4P31645 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC6A4P31645 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC6A4P31645 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC6A4P31645 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC6A4P31645 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC6A4P31645 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.77■□□□□ 0.92
SLC6A4P31645 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC6A4P31645 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC6A4P31645 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC6A4P31645 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SLC6A4P31645 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC6A4P31645 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.77■□□□□ 0.92
SLC6A4P31645 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC6A4P31645 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC6A4P31645 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC6A4P31645 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.77■□□□□ 0.91
SLC6A4P31645 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
SLC6A4P31645 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC6A4P31645 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC6A4P31645 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
SLC6A4P31645 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC6A4P31645 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC6A4P31645 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC6A4P31645 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 AC098590.1-201ENST00000468126 897 ntBASIC20.76■□□□□ 0.91
SLC6A4P31645 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC6A4P31645 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SLC6A4P31645 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC6A4P31645 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A4P31645 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A4P31645 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC6A4P31645 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A4P31645 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A4P31645 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC6A4P31645 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A4P31645 AC023632.3-201ENST00000521633 145 ntBASIC20.75■□□□□ 0.91
SLC6A4P31645 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms