Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HTR1AP08908 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HTR1AP08908 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.43■□□□□ 0.54
HTR1AP08908 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.43■□□□□ 0.54
HTR1AP08908 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.43■□□□□ 0.54
HTR1AP08908 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.43■□□□□ 0.54
HTR1AP08908 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HTR1AP08908 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.43■□□□□ 0.54
HTR1AP08908 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
HTR1AP08908 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HTR1AP08908 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HTR1AP08908 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HTR1AP08908 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HTR1AP08908 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HTR1AP08908 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HTR1AP08908 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTR1AP08908 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.42■□□□□ 0.54
HTR1AP08908 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.42■□□□□ 0.54
HTR1AP08908 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTR1AP08908 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.42■□□□□ 0.54
HTR1AP08908 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.42■□□□□ 0.54
HTR1AP08908 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTR1AP08908 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HTR1AP08908 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTR1AP08908 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTR1AP08908 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HTR1AP08908 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTR1AP08908 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
HTR1AP08908 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.42■□□□□ 0.54
HTR1AP08908 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.42■□□□□ 0.54
HTR1AP08908 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HTR1AP08908 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.42■□□□□ 0.54
HTR1AP08908 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
HTR1AP08908 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HTR1AP08908 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTR1AP08908 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.42■□□□□ 0.54
HTR1AP08908 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTR1AP08908 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HTR1AP08908 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTR1AP08908 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTR1AP08908 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTR1AP08908 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1AP08908 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1AP08908 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1AP08908 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HTR1AP08908 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.41■□□□□ 0.54
HTR1AP08908 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1AP08908 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1AP08908 AL691432.2-201ENST00000607222 2038 ntBASIC18.41■□□□□ 0.54
HTR1AP08908 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.41■□□□□ 0.54
HTR1AP08908 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HTR1AP08908 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.41■□□□□ 0.54
HTR1AP08908 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.41■□□□□ 0.54
HTR1AP08908 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.41■□□□□ 0.54
HTR1AP08908 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.41■□□□□ 0.54
HTR1AP08908 SMUG1P1-201ENST00000590640 811 ntBASIC18.41■□□□□ 0.54
HTR1AP08908 MIR4466-201ENST00000606121 54 ntBASIC18.41■□□□□ 0.54
HTR1AP08908 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.41■□□□□ 0.54
HTR1AP08908 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HTR1AP08908 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1AP08908 Z82202.1-201ENST00000623446 1880 ntBASIC18.41■□□□□ 0.54
HTR1AP08908 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1AP08908 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.41■□□□□ 0.54
HTR1AP08908 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1AP08908 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.41■□□□□ 0.54
HTR1AP08908 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1AP08908 AC007613.1-201ENST00000572811 2597 ntBASIC18.4■□□□□ 0.54
HTR1AP08908 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
HTR1AP08908 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.4■□□□□ 0.54
HTR1AP08908 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.4■□□□□ 0.54
HTR1AP08908 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
HTR1AP08908 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1AP08908 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
HTR1AP08908 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1AP08908 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.4■□□□□ 0.54
HTR1AP08908 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1AP08908 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1AP08908 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.4■□□□□ 0.54
HTR1AP08908 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
HTR1AP08908 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.4■□□□□ 0.54
HTR1AP08908 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.4■□□□□ 0.54
HTR1AP08908 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.4■□□□□ 0.54
HTR1AP08908 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1AP08908 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.4■□□□□ 0.54
HTR1AP08908 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1AP08908 TMEM179-206ENST00000616017 1645 ntBASIC18.4■□□□□ 0.54
HTR1AP08908 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1AP08908 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.4■□□□□ 0.54
HTR1AP08908 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HTR1AP08908 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.4■□□□□ 0.54
HTR1AP08908 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1AP08908 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
HTR1AP08908 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.4■□□□□ 0.54
HTR1AP08908 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.4■□□□□ 0.54
HTR1AP08908 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1AP08908 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.4■□□□□ 0.54
HTR1AP08908 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HTR1AP08908 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HTR1AP08908 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
HTR1AP08908 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms