Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
CSN3P07498 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSN3P07498 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CSN3P07498 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSN3P07498 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSN3P07498 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CSN3P07498 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.84■□□□□ 0.13
CSN3P07498 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSN3P07498 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSN3P07498 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSN3P07498 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CSN3P07498 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.84■□□□□ 0.13
CSN3P07498 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSN3P07498 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CSN3P07498 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSN3P07498 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSN3P07498 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.83■□□□□ 0.12
CSN3P07498 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.83■□□□□ 0.12
CSN3P07498 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.83■□□□□ 0.12
CSN3P07498 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSN3P07498 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.83■□□□□ 0.12
CSN3P07498 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CSN3P07498 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSN3P07498 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSN3P07498 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CSN3P07498 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
CSN3P07498 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CSN3P07498 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.83■□□□□ 0.12
CSN3P07498 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CSN3P07498 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSN3P07498 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CSN3P07498 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSN3P07498 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
CSN3P07498 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSN3P07498 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CSN3P07498 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.82■□□□□ 0.12
CSN3P07498 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.82■□□□□ 0.12
CSN3P07498 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSN3P07498 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CSN3P07498 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSN3P07498 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSN3P07498 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSN3P07498 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSN3P07498 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSN3P07498 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.82■□□□□ 0.12
CSN3P07498 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.82■□□□□ 0.12
CSN3P07498 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.82■□□□□ 0.12
CSN3P07498 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CSN3P07498 AL050303.2-201ENST00000619798 666 ntBASIC15.82■□□□□ 0.12
CSN3P07498 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.82■□□□□ 0.12
CSN3P07498 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.82■□□□□ 0.12
CSN3P07498 AC068338.2-201ENST00000563278 1430 ntBASIC15.82■□□□□ 0.12
CSN3P07498 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSN3P07498 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSN3P07498 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSN3P07498 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSN3P07498 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.82■□□□□ 0.12
CSN3P07498 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSN3P07498 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CSN3P07498 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSN3P07498 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.82■□□□□ 0.12
CSN3P07498 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSN3P07498 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.82■□□□□ 0.12
CSN3P07498 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CSN3P07498 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSN3P07498 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CSN3P07498 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSN3P07498 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.81■□□□□ 0.12
CSN3P07498 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSN3P07498 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSN3P07498 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSN3P07498 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSN3P07498 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSN3P07498 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSN3P07498 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.81■□□□□ 0.12
CSN3P07498 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.81■□□□□ 0.12
CSN3P07498 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSN3P07498 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.81■□□□□ 0.12
CSN3P07498 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.81■□□□□ 0.12
CSN3P07498 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.81■□□□□ 0.12
CSN3P07498 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSN3P07498 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.81■□□□□ 0.12
CSN3P07498 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CSN3P07498 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.81■□□□□ 0.12
CSN3P07498 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSN3P07498 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSN3P07498 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.81■□□□□ 0.12
CSN3P07498 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.81■□□□□ 0.12
CSN3P07498 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSN3P07498 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.81■□□□□ 0.12
CSN3P07498 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.8■□□□□ 0.12
CSN3P07498 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSN3P07498 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CSN3P07498 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CSN3P07498 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSN3P07498 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.8■□□□□ 0.12
CSN3P07498 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSN3P07498 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSN3P07498 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSN3P07498 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms