Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.25■□□□□ 0.83
APOA4P06727 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.25■□□□□ 0.83
APOA4P06727 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
APOA4P06727 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APOA4P06727 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
APOA4P06727 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
APOA4P06727 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
APOA4P06727 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APOA4P06727 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
APOA4P06727 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.24■□□□□ 0.83
APOA4P06727 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APOA4P06727 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APOA4P06727 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
APOA4P06727 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
APOA4P06727 AL162412.1-201ENST00000567129 965 ntBASIC20.24■□□□□ 0.83
APOA4P06727 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.24■□□□□ 0.83
APOA4P06727 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.24■□□□□ 0.83
APOA4P06727 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APOA4P06727 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APOA4P06727 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
APOA4P06727 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
APOA4P06727 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APOA4P06727 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
APOA4P06727 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APOA4P06727 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.23■□□□□ 0.83
APOA4P06727 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
APOA4P06727 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
APOA4P06727 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APOA4P06727 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.23■□□□□ 0.83
APOA4P06727 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
APOA4P06727 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.23■□□□□ 0.83
APOA4P06727 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.23■□□□□ 0.83
APOA4P06727 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
APOA4P06727 AC007322.1-201ENST00000426983 750 ntBASIC20.23■□□□□ 0.83
APOA4P06727 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
APOA4P06727 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.23■□□□□ 0.83
APOA4P06727 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
APOA4P06727 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APOA4P06727 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
APOA4P06727 AC080038.1-201ENST00000611274 1154 ntBASIC20.23■□□□□ 0.83
APOA4P06727 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
APOA4P06727 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APOA4P06727 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
APOA4P06727 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.23■□□□□ 0.83
APOA4P06727 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.22■□□□□ 0.83
APOA4P06727 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APOA4P06727 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APOA4P06727 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.22■□□□□ 0.83
APOA4P06727 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APOA4P06727 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.22■□□□□ 0.83
APOA4P06727 AFG3L1P-217ENST00000557444 2447 ntBASIC20.22■□□□□ 0.83
APOA4P06727 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
APOA4P06727 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APOA4P06727 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
APOA4P06727 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
APOA4P06727 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
APOA4P06727 CNN2P6-201ENST00000439038 900 ntBASIC20.22■□□□□ 0.83
APOA4P06727 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.22■□□□□ 0.83
APOA4P06727 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
APOA4P06727 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.22■□□□□ 0.83
APOA4P06727 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
APOA4P06727 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APOA4P06727 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APOA4P06727 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APOA4P06727 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APOA4P06727 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APOA4P06727 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.22■□□□□ 0.83
APOA4P06727 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APOA4P06727 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.21■□□□□ 0.83
APOA4P06727 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
APOA4P06727 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
APOA4P06727 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
APOA4P06727 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
APOA4P06727 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APOA4P06727 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APOA4P06727 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
APOA4P06727 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.21■□□□□ 0.83
APOA4P06727 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APOA4P06727 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
APOA4P06727 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
APOA4P06727 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.21■□□□□ 0.83
APOA4P06727 AC092666.2-201ENST00000613287 246 ntBASIC20.21■□□□□ 0.83
APOA4P06727 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APOA4P06727 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.21■□□□□ 0.83
APOA4P06727 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.21■□□□□ 0.83
APOA4P06727 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
APOA4P06727 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.21■□□□□ 0.83
APOA4P06727 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
APOA4P06727 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.21■□□□□ 0.83
APOA4P06727 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
APOA4P06727 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.2■□□□□ 0.83
APOA4P06727 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
APOA4P06727 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
APOA4P06727 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
APOA4P06727 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
APOA4P06727 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.2■□□□□ 0.82
APOA4P06727 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
APOA4P06727 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
APOA4P06727 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.2■□□□□ 0.82
APOA4P06727 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms