Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD3DP04234 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.13■□□□□ 0.33
CD3DP04234 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.13■□□□□ 0.33
CD3DP04234 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CD3DP04234 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CD3DP04234 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CD3DP04234 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD3DP04234 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD3DP04234 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD3DP04234 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD3DP04234 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CD3DP04234 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD3DP04234 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CD3DP04234 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.12■□□□□ 0.33
CD3DP04234 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CD3DP04234 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CD3DP04234 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.12■□□□□ 0.33
CD3DP04234 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD3DP04234 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CD3DP04234 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.12■□□□□ 0.33
CD3DP04234 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CD3DP04234 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD3DP04234 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CD3DP04234 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.12■□□□□ 0.33
CD3DP04234 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CD3DP04234 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.12■□□□□ 0.33
CD3DP04234 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD3DP04234 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD3DP04234 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD3DP04234 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD3DP04234 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD3DP04234 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD3DP04234 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CD3DP04234 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD3DP04234 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD3DP04234 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD3DP04234 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.12■□□□□ 0.33
CD3DP04234 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD3DP04234 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD3DP04234 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.11■□□□□ 0.33
CD3DP04234 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD3DP04234 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD3DP04234 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD3DP04234 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD3DP04234 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD3DP04234 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD3DP04234 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD3DP04234 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.11■□□□□ 0.33
CD3DP04234 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CD3DP04234 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.11■□□□□ 0.33
CD3DP04234 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD3DP04234 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.11■□□□□ 0.33
CD3DP04234 MIR2861-201ENST00000636310 90 ntBASIC17.11■□□□□ 0.33
CD3DP04234 AC093503.3-201ENST00000624917 2352 ntBASIC17.11■□□□□ 0.33
CD3DP04234 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CD3DP04234 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.11■□□□□ 0.33
CD3DP04234 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD3DP04234 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD3DP04234 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.11■□□□□ 0.33
CD3DP04234 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD3DP04234 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CD3DP04234 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD3DP04234 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.1■□□□□ 0.33
CD3DP04234 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.1■□□□□ 0.33
CD3DP04234 TREX1-205ENST00000625293 1783 ntBASIC17.1■□□□□ 0.33
CD3DP04234 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CD3DP04234 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.1■□□□□ 0.33
CD3DP04234 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.1■□□□□ 0.33
CD3DP04234 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.1■□□□□ 0.33
CD3DP04234 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.1■□□□□ 0.33
CD3DP04234 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.1■□□□□ 0.33
CD3DP04234 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.1■□□□□ 0.33
CD3DP04234 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.1■□□□□ 0.33
CD3DP04234 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CD3DP04234 NEFHP1-201ENST00000412845 2629 ntBASIC17.1■□□□□ 0.33
CD3DP04234 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD3DP04234 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD3DP04234 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.09■□□□□ 0.33
CD3DP04234 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD3DP04234 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms