Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND1P03886 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.04■□□□□ 0.64
MT-ND1P03886 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND1P03886 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
MT-ND1P03886 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.04■□□□□ 0.64
MT-ND1P03886 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.04■□□□□ 0.64
MT-ND1P03886 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND1P03886 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
MT-ND1P03886 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.03■□□□□ 0.64
MT-ND1P03886 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND1P03886 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND1P03886 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND1P03886 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.03■□□□□ 0.64
MT-ND1P03886 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.03■□□□□ 0.64
MT-ND1P03886 AL139246.5-201ENST00000606645 996 ntBASIC19.03■□□□□ 0.64
MT-ND1P03886 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND1P03886 AC120498.9-201ENST00000339021 3867 ntBASIC19.03■□□□□ 0.64
MT-ND1P03886 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND1P03886 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND1P03886 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND1P03886 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.03■□□□□ 0.64
MT-ND1P03886 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.03■□□□□ 0.64
MT-ND1P03886 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND1P03886 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND1P03886 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
MT-ND1P03886 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-ND1P03886 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.02■□□□□ 0.64
MT-ND1P03886 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
MT-ND1P03886 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.02■□□□□ 0.64
MT-ND1P03886 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.02■□□□□ 0.64
MT-ND1P03886 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MT-ND1P03886 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.02■□□□□ 0.64
MT-ND1P03886 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
MT-ND1P03886 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-ND1P03886 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-ND1P03886 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MT-ND1P03886 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.02■□□□□ 0.64
MT-ND1P03886 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-ND1P03886 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.02■□□□□ 0.64
MT-ND1P03886 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
MT-ND1P03886 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.02■□□□□ 0.64
MT-ND1P03886 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.02■□□□□ 0.64
MT-ND1P03886 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
MT-ND1P03886 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.02■□□□□ 0.63
MT-ND1P03886 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
MT-ND1P03886 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MT-ND1P03886 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MT-ND1P03886 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
MT-ND1P03886 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MT-ND1P03886 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MT-ND1P03886 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
MT-ND1P03886 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND1P03886 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND1P03886 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MT-ND1P03886 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
MT-ND1P03886 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.01■□□□□ 0.63
MT-ND1P03886 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND1P03886 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.01■□□□□ 0.63
MT-ND1P03886 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND1P03886 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.01■□□□□ 0.63
MT-ND1P03886 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.01■□□□□ 0.63
MT-ND1P03886 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND1P03886 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND1P03886 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND1P03886 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.01■□□□□ 0.63
MT-ND1P03886 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND1P03886 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.01■□□□□ 0.63
MT-ND1P03886 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND1P03886 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND1P03886 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND1P03886 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
MT-ND1P03886 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19■□□□□ 0.63
MT-ND1P03886 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND1P03886 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND1P03886 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19■□□□□ 0.63
MT-ND1P03886 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19■□□□□ 0.63
MT-ND1P03886 AL354811.1-201ENST00000610286 706 ntBASIC19■□□□□ 0.63
MT-ND1P03886 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19■□□□□ 0.63
MT-ND1P03886 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MT-ND1P03886 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND1P03886 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND1P03886 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND1P03886 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19■□□□□ 0.63
MT-ND1P03886 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND1P03886 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND1P03886 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND1P03886 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND1P03886 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
MT-ND1P03886 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND1P03886 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
MT-ND1P03886 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.99■□□□□ 0.63
MT-ND1P03886 BX323043.1-201ENST00000641006 1765 ntBASIC18.99■□□□□ 0.63
MT-ND1P03886 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.99■□□□□ 0.63
MT-ND1P03886 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND1P03886 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND1P03886 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND1P03886 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MT-ND1P03886 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND1P03886 EEF1DP3-203ENST00000566025 782 ntBASIC18.99■□□□□ 0.63
MT-ND1P03886 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms