Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.46■□□□□ 0.39
HLA-DQB1P01920 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQB1P01920 AC009237.3-201ENST00000393279 1427 ntBASIC17.46■□□□□ 0.39
HLA-DQB1P01920 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
HLA-DQB1P01920 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.46■□□□□ 0.38
HLA-DQB1P01920 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
HLA-DQB1P01920 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 MIR4466-201ENST00000606121 54 ntBASIC17.45■□□□□ 0.38
HLA-DQB1P01920 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB1P01920 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB1P01920 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DQB1P01920 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.43■□□□□ 0.38
HLA-DQB1P01920 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB1P01920 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DQB1P01920 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB1P01920 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB1P01920 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.43■□□□□ 0.38
HLA-DQB1P01920 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB1P01920 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB1P01920 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB1P01920 AC005332.8-201ENST00000622750 2735 ntBASIC17.43■□□□□ 0.38
HLA-DQB1P01920 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB1P01920 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.43■□□□□ 0.38
HLA-DQB1P01920 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB1P01920 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB1P01920 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB1P01920 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms