Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
URB1O60287 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
URB1O60287 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.1■□□□□ 0.65
URB1O60287 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
URB1O60287 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
URB1O60287 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
URB1O60287 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
URB1O60287 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
URB1O60287 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
URB1O60287 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
URB1O60287 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
URB1O60287 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
URB1O60287 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
URB1O60287 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
URB1O60287 MIR1238-201ENST00000408483 83 ntBASIC19.1■□□□□ 0.65
URB1O60287 KRT18P56-201ENST00000507275 550 ntBASIC19.1■□□□□ 0.65
URB1O60287 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.1■□□□□ 0.65
URB1O60287 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
URB1O60287 AC010542.4-201ENST00000563151 1910 ntBASIC19.1■□□□□ 0.65
URB1O60287 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
URB1O60287 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
URB1O60287 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
URB1O60287 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
URB1O60287 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
URB1O60287 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
URB1O60287 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.09■□□□□ 0.65
URB1O60287 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
URB1O60287 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
URB1O60287 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.09■□□□□ 0.65
URB1O60287 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.09■□□□□ 0.65
URB1O60287 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
URB1O60287 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
URB1O60287 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
URB1O60287 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
URB1O60287 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.09■□□□□ 0.65
URB1O60287 FITM1-202ENST00000559294 800 ntBASIC19.09■□□□□ 0.65
URB1O60287 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
URB1O60287 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
URB1O60287 AC092053.2-201ENST00000640557 1818 ntBASIC19.09■□□□□ 0.65
URB1O60287 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
URB1O60287 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
URB1O60287 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
URB1O60287 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
URB1O60287 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
URB1O60287 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
URB1O60287 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
URB1O60287 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
URB1O60287 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
URB1O60287 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
URB1O60287 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.65
URB1O60287 AC027702.1-201ENST00000563810 1770 ntBASIC19.08■□□□□ 0.65
URB1O60287 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
URB1O60287 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
URB1O60287 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
URB1O60287 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
URB1O60287 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
URB1O60287 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
URB1O60287 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
URB1O60287 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.08■□□□□ 0.64
URB1O60287 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
URB1O60287 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
URB1O60287 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.08■□□□□ 0.64
URB1O60287 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.08■□□□□ 0.64
URB1O60287 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.08■□□□□ 0.64
URB1O60287 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
URB1O60287 AL358472.4-201ENST00000633140 710 ntBASIC19.08■□□□□ 0.64
URB1O60287 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
URB1O60287 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.08■□□□□ 0.64
URB1O60287 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
URB1O60287 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
URB1O60287 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
URB1O60287 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.07■□□□□ 0.64
URB1O60287 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
URB1O60287 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
URB1O60287 AK4P3-201ENST00000418260 669 ntBASIC19.07■□□□□ 0.64
URB1O60287 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
URB1O60287 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
URB1O60287 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
URB1O60287 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
URB1O60287 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.07■□□□□ 0.64
URB1O60287 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
URB1O60287 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
URB1O60287 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
URB1O60287 AC116050.2-201ENST00000612102 1779 ntBASIC19.07■□□□□ 0.64
URB1O60287 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
URB1O60287 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
URB1O60287 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.07■□□□□ 0.64
URB1O60287 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
URB1O60287 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.07■□□□□ 0.64
URB1O60287 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
URB1O60287 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.07■□□□□ 0.64
URB1O60287 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
URB1O60287 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
URB1O60287 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
URB1O60287 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
URB1O60287 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.06■□□□□ 0.64
URB1O60287 AC026471.6-201ENST00000622954 1905 ntBASIC19.06■□□□□ 0.64
URB1O60287 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
URB1O60287 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
URB1O60287 AL390719.1-204ENST00000412397 1219 ntBASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms