Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KPNA4O00629 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.82■□□□□ 0.6
KPNA4O00629 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KPNA4O00629 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.82■□□□□ 0.6
KPNA4O00629 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.82■□□□□ 0.6
KPNA4O00629 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.82■□□□□ 0.6
KPNA4O00629 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KPNA4O00629 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.82■□□□□ 0.6
KPNA4O00629 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KPNA4O00629 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KPNA4O00629 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KPNA4O00629 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KPNA4O00629 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KPNA4O00629 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KPNA4O00629 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.82■□□□□ 0.6
KPNA4O00629 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KPNA4O00629 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.82■□□□□ 0.6
KPNA4O00629 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KPNA4O00629 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KPNA4O00629 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KPNA4O00629 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
KPNA4O00629 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
KPNA4O00629 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KPNA4O00629 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KPNA4O00629 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KPNA4O00629 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KPNA4O00629 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KPNA4O00629 LINC02228-203ENST00000641970 1355 ntBASIC18.81■□□□□ 0.6
KPNA4O00629 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KPNA4O00629 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.81■□□□□ 0.6
KPNA4O00629 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KPNA4O00629 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KPNA4O00629 AC027702.1-201ENST00000563810 1770 ntBASIC18.81■□□□□ 0.6
KPNA4O00629 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
KPNA4O00629 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KPNA4O00629 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KPNA4O00629 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KPNA4O00629 POU5F1P4-201ENST00000413175 1085 ntBASIC18.81■□□□□ 0.6
KPNA4O00629 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.81■□□□□ 0.6
KPNA4O00629 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KPNA4O00629 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.81■□□□□ 0.6
KPNA4O00629 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.81■□□□□ 0.6
KPNA4O00629 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.81■□□□□ 0.6
KPNA4O00629 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KPNA4O00629 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KPNA4O00629 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KPNA4O00629 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KPNA4O00629 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
KPNA4O00629 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KPNA4O00629 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.81■□□□□ 0.6
KPNA4O00629 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KPNA4O00629 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KPNA4O00629 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KPNA4O00629 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.8■□□□□ 0.6
KPNA4O00629 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KPNA4O00629 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KPNA4O00629 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.8■□□□□ 0.6
KPNA4O00629 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KPNA4O00629 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.8■□□□□ 0.6
KPNA4O00629 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KPNA4O00629 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
KPNA4O00629 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.8■□□□□ 0.6
KPNA4O00629 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.8■□□□□ 0.6
KPNA4O00629 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KPNA4O00629 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KPNA4O00629 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KPNA4O00629 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.8■□□□□ 0.6
KPNA4O00629 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.8■□□□□ 0.6
KPNA4O00629 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KPNA4O00629 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.8■□□□□ 0.6
KPNA4O00629 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
KPNA4O00629 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KPNA4O00629 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
KPNA4O00629 AIRN-201ENST00000601203 4374 ntBASIC18.8■□□□□ 0.6
KPNA4O00629 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KPNA4O00629 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KPNA4O00629 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KPNA4O00629 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.8■□□□□ 0.6
KPNA4O00629 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KPNA4O00629 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KPNA4O00629 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KPNA4O00629 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KPNA4O00629 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.79■□□□□ 0.6
KPNA4O00629 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KPNA4O00629 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KPNA4O00629 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.79■□□□□ 0.6
KPNA4O00629 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.79■□□□□ 0.6
KPNA4O00629 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.79■□□□□ 0.6
KPNA4O00629 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.79■□□□□ 0.6
KPNA4O00629 AC138907.5-202ENST00000569484 235 ntBASIC18.79■□□□□ 0.6
KPNA4O00629 AC104187.1-201ENST00000607510 612 ntBASIC18.79■□□□□ 0.6
KPNA4O00629 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.79■□□□□ 0.6
KPNA4O00629 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KPNA4O00629 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.79■□□□□ 0.6
KPNA4O00629 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KPNA4O00629 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
KPNA4O00629 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.79■□□□□ 0.6
KPNA4O00629 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KPNA4O00629 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KPNA4O00629 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms