Protein–RNA interactions for Protein: A0A1B0GVZ6

MBD3L2B, Methyl-CpG-binding domain protein 3-like 2B, humanhuman

Predicted RBP Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L2BA0A1B0GVZ6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 AL135905.2-201ENST00000584934 1404 ntBASIC17.39■□□□□ 0.38
MBD3L2BA0A1B0GVZ6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 AP001412.1-201ENST00000608405 714 ntBASIC17.39■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 AC073912.3-201ENST00000624414 853 ntBASIC17.39■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.39■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 TSPY7P-201ENST00000431358 1114 ntBASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 AL049637.2-201ENST00000641778 930 ntBASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.37■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.37■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.37■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.37■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.37■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.37■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.37■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 RARRES2P10-201ENST00000564312 460 ntBASIC17.37■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 AL121829.2-201ENST00000620908 328 ntBASIC17.37■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L2BA0A1B0GVZ6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms