Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.02■□□□□ -0
IGKV3D-20A0A0C4DH25 MIR2861-201ENST00000636310 90 ntBASIC15.02■□□□□ -0
IGKV3D-20A0A0C4DH25 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.02□□□□□ -0.01
IGKV3D-20A0A0C4DH25 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 RASA4CP-201ENST00000424092 1398 ntBASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 AC096631.2-201ENST00000436136 790 ntBASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 AC116562.4-201ENST00000641316 2276 ntBASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-20A0A0C4DH25 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 EDA-201ENST00000338901 1233 ntBASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 AC245052.3-201ENST00000450182 901 ntBASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 AC106739.1-201ENST00000617035 715 ntBASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 LBX2-AS1-202ENST00000603175 2083 ntBASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-20A0A0C4DH25 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 AL158211.5-201ENST00000623583 2518 ntBASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 MIR939-201ENST00000401314 82 ntBASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 KRT16P2-201ENST00000414673 1423 ntBASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-20A0A0C4DH25 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms