Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV16A0A0A6YYK6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 MIR572-201ENST00000384983 95 ntBASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 AL031432.3-201ENST00000607698 485 ntBASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV16A0A0A6YYK6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 IRS3P-201ENST00000223076 1006 ntBASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 AL354811.1-201ENST00000610286 706 ntBASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV16A0A0A6YYK6 AC020907.5-201ENST00000624372 1936 ntBASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 AC105265.2-201ENST00000467189 838 ntBASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 AL358852.1-201ENST00000623174 1268 ntBASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV16A0A0A6YYK6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms