Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC8.69□□□□□ -1.02
MTHFRP42898 RBM18-201ENST00000417201 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
MTHFRP42898 AL513548.3-201ENST00000611708 2865 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
MTHFRP42898 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
MTHFRP42898 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
MTHFRP42898 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
MTHFRP42898 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC8.69□□□□□ -1.02
MTHFRP42898 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC8.69□□□□□ -1.02
MTHFRP42898 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC8.69□□□□□ -1.02
MTHFRP42898 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC8.69□□□□□ -1.02
MTHFRP42898 AMD1-202ENST00000368877 1605 ntTSL 2 BASIC8.69□□□□□ -1.02
MTHFRP42898 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
MTHFRP42898 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC8.68□□□□□ -1.02
MTHFRP42898 AL353583.1-201ENST00000624195 1855 ntBASIC8.68□□□□□ -1.02
MTHFRP42898 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
MTHFRP42898 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
MTHFRP42898 ST5-237ENST00000530991 3396 ntTSL 2 BASIC8.68□□□□□ -1.02
MTHFRP42898 CTAGE9-201ENST00000314099 2334 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
MTHFRP42898 CXorf57-201ENST00000372544 3607 ntTSL 2 BASIC8.68□□□□□ -1.02
MTHFRP42898 U3.1-201ENST00000362500 215 ntBASIC8.68□□□□□ -1.02
MTHFRP42898 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
MTHFRP42898 AC003080.1-201ENST00000413552 767 ntBASIC8.68□□□□□ -1.02
MTHFRP42898 AC244157.1-201ENST00000415642 163 ntBASIC8.68□□□□□ -1.02
MTHFRP42898 RNF212B-203ENST00000430154 903 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
MTHFRP42898 AL606752.1-201ENST00000435442 666 ntBASIC8.68□□□□□ -1.02
MTHFRP42898 EFCAB14P1-201ENST00000442409 463 ntBASIC8.68□□□□□ -1.02
MTHFRP42898 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC8.68□□□□□ -1.02
MTHFRP42898 RPL7P14-201ENST00000449851 741 ntBASIC8.68□□□□□ -1.02
MTHFRP42898 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC8.68□□□□□ -1.02
MTHFRP42898 AC090539.2-201ENST00000523425 671 ntBASIC8.68□□□□□ -1.02
MTHFRP42898 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC8.68□□□□□ -1.02
MTHFRP42898 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC8.68□□□□□ -1.02
MTHFRP42898 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
MTHFRP42898 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC8.68□□□□□ -1.02
MTHFRP42898 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
MTHFRP42898 AC112484.4-201ENST00000567253 811 ntBASIC8.68□□□□□ -1.02
MTHFRP42898 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC8.68□□□□□ -1.02
MTHFRP42898 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC8.68□□□□□ -1.02
MTHFRP42898 AC113143.2-201ENST00000603849 394 ntBASIC8.68□□□□□ -1.02
MTHFRP42898 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC8.68□□□□□ -1.02
MTHFRP42898 MIR6761-201ENST00000617899 72 ntBASIC8.68□□□□□ -1.02
MTHFRP42898 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC8.68□□□□□ -1.02
MTHFRP42898 CCDC190-203ENST00000367912 2605 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
MTHFRP42898 C8orf48-201ENST00000297324 1445 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
MTHFRP42898 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
MTHFRP42898 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
MTHFRP42898 PARP9-205ENST00000477522 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
MTHFRP42898 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
MTHFRP42898 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
MTHFRP42898 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
MTHFRP42898 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
MTHFRP42898 AL845331.3-201ENST00000562821 2028 ntTSL 2 BASIC8.68□□□□□ -1.02
MTHFRP42898 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
MTHFRP42898 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
MTHFRP42898 ZNF80-203ENST00000619534 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
MTHFRP42898 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
MTHFRP42898 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC8.68□□□□□ -1.02
MTHFRP42898 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC8.67□□□□□ -1.02
MTHFRP42898 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
MTHFRP42898 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
MTHFRP42898 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC8.67□□□□□ -1.02
MTHFRP42898 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
MTHFRP42898 HRH2-204ENST00000636584 4067 ntTSL 3 BASIC8.67□□□□□ -1.02
MTHFRP42898 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
MTHFRP42898 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
MTHFRP42898 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
MTHFRP42898 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
MTHFRP42898 ZNF738-202ENST00000380870 1142 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
MTHFRP42898 RNA5SP297-201ENST00000391029 113 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 EEF1A1P31-201ENST00000415978 1131 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 EHHADH-AS1-201ENST00000417720 1416 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
MTHFRP42898 GAPDHP46-201ENST00000424043 994 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
MTHFRP42898 RPL12P4-201ENST00000432629 497 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 AP000705.2-201ENST00000433524 1386 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 LINC00379-202ENST00000438789 464 ntTSL 3 BASIC8.67□□□□□ -1.02
MTHFRP42898 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC8.67□□□□□ -1.02
MTHFRP42898 AC002553.1-201ENST00000442828 802 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 PGGT1BP1-201ENST00000455321 1023 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 AL049636.1-201ENST00000455736 1357 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
MTHFRP42898 RCAN1-208ENST00000482533 2686 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
MTHFRP42898 RPL12P32-201ENST00000484010 494 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC8.67□□□□□ -1.02
MTHFRP42898 AC127024.1-201ENST00000490847 418 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
MTHFRP42898 AK6-204ENST00000512561 587 ntTSL 5 BASIC8.67□□□□□ -1.02
MTHFRP42898 AC114801.1-201ENST00000512633 297 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 LINC02071-201ENST00000514726 1723 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
MTHFRP42898 RN7SKP14-201ENST00000516000 329 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 AC115837.1-201ENST00000517662 1001 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 IGLV1-41-201ENST00000519790 406 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC8.67□□□□□ -1.02
MTHFRP42898 AP003174.3-201ENST00000537926 516 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 AC027544.1-201ENST00000538408 433 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 AC073913.2-201ENST00000541512 145 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 AL355076.3-201ENST00000555838 587 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC8.67□□□□□ -1.02
MTHFRP42898 RBM22P13-201ENST00000569805 1244 ntBASIC8.67□□□□□ -1.02
MTHFRP42898 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms