RNA–Protein interactions for RNA: ENST00000424043.3

GAPDHP46-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 46, humanhuman

BASIC

Gene GAPDHP46, Length 994 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP46-201ENST00000424043 AEBP2Q6ZN18 517 aaPredicted RBP27.09■■□□□ 1.93
GAPDHP46-201ENST00000424043 CHIC1Q5VXU3 224 aa26.12■■□□□ 1.77
GAPDHP46-201ENST00000424043 PHF23Q9BUL5 403 aaPredicted RBP23.03■■□□□ 1.28
GAPDHP46-201ENST00000424043 SENP3Q9H4L4 574 aaPredicted RBP22.9■■□□□ 1.26
GAPDHP46-201ENST00000424043 FOXD1Q16676 465 aa21.38■■□□□ 1.01
GAPDHP46-201ENST00000424043 PLPPR3Q6T4P5 718 aa21.04■□□□□ 0.96
GAPDHP46-201ENST00000424043 PPP6R1Q9UPN7 881 aa20.43■□□□□ 0.86
GAPDHP46-201ENST00000424043 ADRA2BP18089 450 aa20.36■□□□□ 0.85
GAPDHP46-201ENST00000424043 PIAS4Q8N2W9 510 aaPredicted RBP20.03■□□□□ 0.8
GAPDHP46-201ENST00000424043 MSH5O43196 834 aa19.7■□□□□ 0.74
GAPDHP46-201ENST00000424043 NISCHQ9Y2I1 1504 aa19.08■□□□□ 0.64
GAPDHP46-201ENST00000424043 MAPK8IP2Q13387 824 aaPredicted RBP18.59■□□□□ 0.57
GAPDHP46-201ENST00000424043 PPP4R3CPQ6ZMV5 832 aa18.56■□□□□ 0.56
GAPDHP46-201ENST00000424043 POTEDQ86YR6 584 aa18.5■□□□□ 0.55
GAPDHP46-201ENST00000424043 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
GAPDHP46-201ENST00000424043 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.52
GAPDHP46-201ENST00000424043 CNKSR2Q8WXI2 1034 aa18.06■□□□□ 0.48
GAPDHP46-201ENST00000424043 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
GAPDHP46-201ENST00000424043 KCNA4P22459 653 aa17.87■□□□□ 0.45
GAPDHP46-201ENST00000424043 HOXD11P31277 338 aaPredicted RBP17.79■□□□□ 0.44
GAPDHP46-201ENST00000424043 RNF216Q9NWF9 866 aaPredicted RBP17.77■□□□□ 0.44
GAPDHP46-201ENST00000424043 NPM3O75607 178 aaKnown RBP17.75■□□□□ 0.43
GAPDHP46-201ENST00000424043 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
GAPDHP46-201ENST00000424043 ABCC9O60706 1549 aa17.24■□□□□ 0.35
GAPDHP46-201ENST00000424043 DNAJC5BQ9UF47 199 aa17.22■□□□□ 0.35
GAPDHP46-201ENST00000424043 CCDC180Q9P1Z9 1646 aa17.15■□□□□ 0.34
GAPDHP46-201ENST00000424043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.93■□□□□ 0.3
GAPDHP46-201ENST00000424043 RNF39Q9H2S5 420 aa16.92■□□□□ 0.3
GAPDHP46-201ENST00000424043 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
GAPDHP46-201ENST00000424043 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
GAPDHP46-201ENST00000424043 U3KPZ7 1027 aaPredicted RBP16.68■□□□□ 0.26
GAPDHP46-201ENST00000424043 C1QBPQ07021 282 aaKnown RBP16.66■□□□□ 0.26
GAPDHP46-201ENST00000424043 CACNB1Q02641 598 aaPredicted RBP16.65■□□□□ 0.26
GAPDHP46-201ENST00000424043 ZBTB22O15209 634 aa16.47■□□□□ 0.23
GAPDHP46-201ENST00000424043 FOXD4L1Q9NU39 408 aa16.45■□□□□ 0.22
GAPDHP46-201ENST00000424043 RB1CC1Q8TDY2 1594 aa16.42■□□□□ 0.22
GAPDHP46-201ENST00000424043 MYCNP04198 464 aaPredicted RBP16.34■□□□□ 0.21
GAPDHP46-201ENST00000424043 SPINK5Q9NQ38 1064 aaPredicted RBP16.32■□□□□ 0.2
GAPDHP46-201ENST00000424043 DCAF8L2P0C7V8 631 aa16.3■□□□□ 0.2
GAPDHP46-201ENST00000424043 NACADO15069 1562 aa16.28■□□□□ 0.2
GAPDHP46-201ENST00000424043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.25■□□□□ 0.19
GAPDHP46-201ENST00000424043 HNRNPUL2Q1KMD3 747 aaKnown RBP16.25■□□□□ 0.19
GAPDHP46-201ENST00000424043 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.19
GAPDHP46-201ENST00000424043 CAPN15O75808 1086 aa16.2■□□□□ 0.18
GAPDHP46-201ENST00000424043 EHMT2Q96KQ7 1210 aa16.15■□□□□ 0.18
GAPDHP46-201ENST00000424043 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
GAPDHP46-201ENST00000424043 APLP2Q06481 763 aa16.1■□□□□ 0.17
GAPDHP46-201ENST00000424043 TRHP20396 242 aaPredicted RBP16.08■□□□□ 0.16
GAPDHP46-201ENST00000424043 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
GAPDHP46-201ENST00000424043 ATF5Q9Y2D1 282 aaPredicted RBP16.05■□□□□ 0.16
GAPDHP46-201ENST00000424043 DSG3P32926 999 aa16.03■□□□□ 0.16
GAPDHP46-201ENST00000424043 MYO15BQ96JP2 1530 aa16■□□□□ 0.15
GAPDHP46-201ENST00000424043 ZNF219Q9P2Y4 722 aaPredicted RBP15.99■□□□□ 0.15
GAPDHP46-201ENST00000424043 UNC13AQ9UPW8 1703 aa15.91■□□□□ 0.14
GAPDHP46-201ENST00000424043 ABCB7O75027 752 aa15.91■□□□□ 0.14
GAPDHP46-201ENST00000424043 ATXN8OSP0DMR3 200 aa15.87■□□□□ 0.13
GAPDHP46-201ENST00000424043 BICRAQ9NZM4 1560 aa15.82■□□□□ 0.12
GAPDHP46-201ENST00000424043 POLA2Q14181 598 aa15.77■□□□□ 0.12
GAPDHP46-201ENST00000424043 ZCCHC6Q5VYS8 1495 aaKnown RBP15.77■□□□□ 0.11
GAPDHP46-201ENST00000424043 DCAF1Q9Y4B6 1507 aa15.76■□□□□ 0.11
GAPDHP46-201ENST00000424043 SHROOM4Q9ULL8 1493 aa15.72■□□□□ 0.11
GAPDHP46-201ENST00000424043 SCRIBQ14160 1630 aa15.61■□□□□ 0.09
GAPDHP46-201ENST00000424043 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
GAPDHP46-201ENST00000424043 CC2D2AQ9P2K1 1620 aa15.55■□□□□ 0.08
GAPDHP46-201ENST00000424043 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
GAPDHP46-201ENST00000424043 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
GAPDHP46-201ENST00000424043 MKRN4PQ13434 485 aaPredicted RBP15.32■□□□□ 0.04
GAPDHP46-201ENST00000424043 FBLN2P98095 1184 aa15.24■□□□□ 0.03
GAPDHP46-201ENST00000424043 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
GAPDHP46-201ENST00000424043 RBM42Q9BTD8 480 aaKnown RBP15.17■□□□□ 0.02
GAPDHP46-201ENST00000424043 DNAJC5Q9H3Z4 198 aa15.13■□□□□ 0.01
GAPDHP46-201ENST00000424043 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
GAPDHP46-201ENST00000424043 SPDYE2BA6NHP3 402 aa14.99□□□□□ -0.01
GAPDHP46-201ENST00000424043 SPDYE6P0CI01 402 aa14.99□□□□□ -0.01
GAPDHP46-201ENST00000424043 SPDYE2Q495Y8 402 aa14.99□□□□□ -0.01
GAPDHP46-201ENST00000424043 AKT1S1Q96B36 256 aa14.98□□□□□ -0.01
GAPDHP46-201ENST00000424043 ERCC6Q03468 1493 aa14.97□□□□□ -0.01
GAPDHP46-201ENST00000424043 ATAD2BQ9ULI0 1458 aa14.94□□□□□ -0.02
GAPDHP46-201ENST00000424043 SMARCA2P51531 1590 aa14.94□□□□□ -0.02
GAPDHP46-201ENST00000424043 ZNF692Q9BU19 519 aaPredicted RBP14.93□□□□□ -0.02
GAPDHP46-201ENST00000424043 CUX2O14529 1486 aa14.93□□□□□ -0.02
GAPDHP46-201ENST00000424043 REM2Q8IYK8 340 aaPredicted RBP14.89□□□□□ -0.03
GAPDHP46-201ENST00000424043 SMARCA4P51532 1647 aa14.88□□□□□ -0.03
GAPDHP46-201ENST00000424043 SSUH2Q9Y2M2 353 aa14.88□□□□□ -0.03
GAPDHP46-201ENST00000424043 HMGXB3Q12766 1538 aa14.87□□□□□ -0.03
GAPDHP46-201ENST00000424043 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
GAPDHP46-201ENST00000424043 BAZ1BQ9UIG0 1483 aaKnown RBP14.83□□□□□ -0.03
GAPDHP46-201ENST00000424043 SPDYE4A6NLX3 237 aa14.77□□□□□ -0.05
GAPDHP46-201ENST00000424043 NESP48681 1621 aa14.76□□□□□ -0.05
GAPDHP46-201ENST00000424043 PEG3Q9GZU2 1588 aa14.73□□□□□ -0.05
GAPDHP46-201ENST00000424043 CHRDL2Q6WN34 429 aa14.72□□□□□ -0.05
GAPDHP46-201ENST00000424043 PITPNM1O00562 1244 aa14.71□□□□□ -0.05
GAPDHP46-201ENST00000424043 LAMC3Q9Y6N6 1575 aa14.69□□□□□ -0.06
GAPDHP46-201ENST00000424043 PDS5BQ9NTI5 1447 aa14.67□□□□□ -0.06
GAPDHP46-201ENST00000424043 MROH2BQ7Z745 1585 aa14.66□□□□□ -0.06
GAPDHP46-201ENST00000424043 SPDYE1Q8NFV5 336 aaPredicted RBP14.61□□□□□ -0.07
GAPDHP46-201ENST00000424043 CLEC11AQ9Y240 323 aa14.6□□□□□ -0.07
GAPDHP46-201ENST00000424043 THOC2Q8NI27 1593 aaKnown RBP14.6□□□□□ -0.07
GAPDHP46-201ENST00000424043 CADPSQ9ULU8 1353 aa14.58□□□□□ -0.08
GAPDHP46-201ENST00000424043 POTEHQ6S545 545 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms