Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNX18Q96RF0 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNX18Q96RF0 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SNX18Q96RF0 LINC01180-201ENST00000589259 2025 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SNX18Q96RF0 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNX18Q96RF0 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SNX18Q96RF0 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC7.59□□□□□ -1.2
SNX18Q96RF0 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
SNX18Q96RF0 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC7.59□□□□□ -1.2
SNX18Q96RF0 SMARCA2-202ENST00000324954 1781 ntTSL 5 BASIC7.59□□□□□ -1.2
SNX18Q96RF0 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
SNX18Q96RF0 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 OR1S1-202ENST00000641544 1474 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 CD244-201ENST00000322302 921 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 HEATR5A-201ENST00000382464 507 ntTSL 2 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 FTH1P10-201ENST00000401830 930 ntBASIC7.58□□□□□ -1.2
SNX18Q96RF0 RNA5SP221-201ENST00000411271 103 ntBASIC7.58□□□□□ -1.2
SNX18Q96RF0 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 MYL6BP1-201ENST00000429485 615 ntBASIC7.58□□□□□ -1.2
SNX18Q96RF0 AL139220.2-213ENST00000431800 674 ntTSL 3 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 LMNTD1-203ENST00000445693 1285 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 AL356310.1-201ENST00000452024 585 ntTSL 3 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 AC100818.1-202ENST00000523748 578 ntTSL 4 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 SCAND2P-204ENST00000541103 669 ntBASIC7.58□□□□□ -1.2
SNX18Q96RF0 FLT1-205ENST00000543394 1275 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 AC013452.1-201ENST00000560630 598 ntBASIC7.58□□□□□ -1.2
SNX18Q96RF0 CYP4A26P-201ENST00000563017 196 ntBASIC7.58□□□□□ -1.2
SNX18Q96RF0 AC013565.2-201ENST00000564874 310 ntBASIC7.58□□□□□ -1.2
SNX18Q96RF0 FRG2JP-201ENST00000568299 832 ntBASIC7.58□□□□□ -1.2
SNX18Q96RF0 SKA2-203ENST00000578105 689 ntTSL 2 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 AC008751.1-201ENST00000600438 342 ntBASIC7.58□□□□□ -1.2
SNX18Q96RF0 LINC02018-202ENST00000608707 445 ntTSL 3 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 uc_338.2-201ENST00000612963 182 ntBASIC7.58□□□□□ -1.2
SNX18Q96RF0 FLT1-208ENST00000617835 434 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 AL355987.5-201ENST00000621585 411 ntBASIC7.58□□□□□ -1.2
SNX18Q96RF0 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SNX18Q96RF0 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SNX18Q96RF0 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 MAPK10-347ENST00000641762 2856 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC106872.6-201ENST00000514228 1346 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 CWC27-204ENST00000508024 2103 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 STAU2-AS1-201ENST00000517604 2076 ntTSL 2 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 RN7SKP133-201ENST00000364845 340 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 RN7SKP204-201ENST00000365481 310 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 PRELID1P2-201ENST00000407805 396 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 VNN3-208ENST00000427187 1214 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 SLC8A1-AS1-204ENST00000427354 790 ntTSL 3 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 ISX-AS1-201ENST00000427881 202 ntTSL 3 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC013402.3-201ENST00000438566 451 ntTSL 2 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 C5orf67-201ENST00000438651 765 ntAPPRIS P2 TSL 3 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 LYZL4-202ENST00000441172 838 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms