RNA–Protein interactions for RNA: ENST00000438566.1

AC013402.3-201, humanhuman

TSL 2 BASIC

Gene AC013402.3, Length 451 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013402.3-201ENST00000438566 AEBP2Q6ZN18 517 aaPredicted RBP31.04■■■□□ 2.56
AC013402.3-201ENST00000438566 CHIC1Q5VXU3 224 aa30.52■■■□□ 2.48
AC013402.3-201ENST00000438566 PHF23Q9BUL5 403 aaPredicted RBP26.86■■□□□ 1.89
AC013402.3-201ENST00000438566 SENP3Q9H4L4 574 aaPredicted RBP26.31■■□□□ 1.8
AC013402.3-201ENST00000438566 PLPPR3Q6T4P5 718 aa24.88■■□□□ 1.57
AC013402.3-201ENST00000438566 FOXD1Q16676 465 aa24.39■■□□□ 1.49
AC013402.3-201ENST00000438566 PPP6R1Q9UPN7 881 aa23.63■■□□□ 1.37
AC013402.3-201ENST00000438566 ADRA2BP18089 450 aa23.61■■□□□ 1.37
AC013402.3-201ENST00000438566 PIAS4Q8N2W9 510 aaPredicted RBP23.05■■□□□ 1.28
AC013402.3-201ENST00000438566 MSH5O43196 834 aa22.42■■□□□ 1.18
AC013402.3-201ENST00000438566 PPP4R3CPQ6ZMV5 832 aa21.95■■□□□ 1.1
AC013402.3-201ENST00000438566 KCNA4P22459 653 aa21.66■■□□□ 1.06
AC013402.3-201ENST00000438566 SCAF1Q9H7N4 1312 aaKnown RBP21.63■■□□□ 1.05
AC013402.3-201ENST00000438566 NCBP3Q53F19 620 aaKnown RBP21.44■■□□□ 1.02
AC013402.3-201ENST00000438566 MAPK8IP2Q13387 824 aaPredicted RBP21.37■■□□□ 1.01
AC013402.3-201ENST00000438566 CNKSR2Q8WXI2 1034 aa21.29■■□□□ 1
AC013402.3-201ENST00000438566 NPM3O75607 178 aaKnown RBP21.12■□□□□ 0.97
AC013402.3-201ENST00000438566 DMRT2Q9Y5R5 561 aa21.04■□□□□ 0.96
AC013402.3-201ENST00000438566 RNF216Q9NWF9 866 aaPredicted RBP20.83■□□□□ 0.93
AC013402.3-201ENST00000438566 HOXD11P31277 338 aaPredicted RBP20.69■□□□□ 0.9
AC013402.3-201ENST00000438566 SLC4A1APQ9BWU0 796 aaKnown RBP20.66■□□□□ 0.9
AC013402.3-201ENST00000438566 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
AC013402.3-201ENST00000438566 EHMT2Q96KQ7 1210 aa20.29■□□□□ 0.84
AC013402.3-201ENST00000438566 DCAF8L1A6NGE4 600 aa20.09■□□□□ 0.81
AC013402.3-201ENST00000438566 POTEDQ86YR6 584 aa20.05■□□□□ 0.8
AC013402.3-201ENST00000438566 CSRNP3Q8WYN3 585 aa19.99■□□□□ 0.79
AC013402.3-201ENST00000438566 ZBTB22O15209 634 aa19.93■□□□□ 0.78
AC013402.3-201ENST00000438566 SLC4A2P04920 1241 aa19.89■□□□□ 0.77
AC013402.3-201ENST00000438566 FOXD4L1Q9NU39 408 aa19.88■□□□□ 0.77
AC013402.3-201ENST00000438566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.74
AC013402.3-201ENST00000438566 MYCNP04198 464 aaPredicted RBP19.51■□□□□ 0.71
AC013402.3-201ENST00000438566 U3KPZ7 1027 aaPredicted RBP19.41■□□□□ 0.7
AC013402.3-201ENST00000438566 NISCHQ9Y2I1 1504 aa19.34■□□□□ 0.69
AC013402.3-201ENST00000438566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.25■□□□□ 0.67
AC013402.3-201ENST00000438566 HNRNPUL2Q1KMD3 747 aaKnown RBP19.25■□□□□ 0.67
AC013402.3-201ENST00000438566 RNF39Q9H2S5 420 aa19.23■□□□□ 0.67
AC013402.3-201ENST00000438566 ATXN8OSP0DMR3 200 aa19.19■□□□□ 0.66
AC013402.3-201ENST00000438566 SAMD1Q6SPF0 538 aaPredicted RBP19.18■□□□□ 0.66
AC013402.3-201ENST00000438566 C1QBPQ07021 282 aaKnown RBP19.02■□□□□ 0.64
AC013402.3-201ENST00000438566 APLP2Q06481 763 aa19■□□□□ 0.63
AC013402.3-201ENST00000438566 ATF5Q9Y2D1 282 aaPredicted RBP18.96■□□□□ 0.63
AC013402.3-201ENST00000438566 SPINK5Q9NQ38 1064 aaPredicted RBP18.8■□□□□ 0.6
AC013402.3-201ENST00000438566 CAPN15O75808 1086 aa18.72■□□□□ 0.59
AC013402.3-201ENST00000438566 ZNF219Q9P2Y4 722 aaPredicted RBP18.69■□□□□ 0.58
AC013402.3-201ENST00000438566 TRHP20396 242 aaPredicted RBP18.68■□□□□ 0.58
AC013402.3-201ENST00000438566 CACNB1Q02641 598 aaPredicted RBP18.57■□□□□ 0.56
AC013402.3-201ENST00000438566 POLA2Q14181 598 aa18.44■□□□□ 0.54
AC013402.3-201ENST00000438566 ABCB7O75027 752 aa18.38■□□□□ 0.53
AC013402.3-201ENST00000438566 DSG3P32926 999 aa18.37■□□□□ 0.53
AC013402.3-201ENST00000438566 FBLN2P98095 1184 aa18.16■□□□□ 0.5
AC013402.3-201ENST00000438566 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
AC013402.3-201ENST00000438566 ZBTB12Q9Y330 459 aaPredicted RBP18.15■□□□□ 0.5
AC013402.3-201ENST00000438566 FKBP8Q14318 412 aa18.05■□□□□ 0.48
AC013402.3-201ENST00000438566 SPDYE4A6NLX3 237 aa17.85■□□□□ 0.45
AC013402.3-201ENST00000438566 OSCARQ8IYS5 282 aa17.78■□□□□ 0.44
AC013402.3-201ENST00000438566 SPDYE2BA6NHP3 402 aa17.68■□□□□ 0.42
AC013402.3-201ENST00000438566 SPDYE6P0CI01 402 aa17.68■□□□□ 0.42
AC013402.3-201ENST00000438566 SPDYE2Q495Y8 402 aa17.68■□□□□ 0.42
AC013402.3-201ENST00000438566 ZNF692Q9BU19 519 aaPredicted RBP17.64■□□□□ 0.41
AC013402.3-201ENST00000438566 PROM2Q8N271 834 aa17.59■□□□□ 0.41
AC013402.3-201ENST00000438566 SSUH2Q9Y2M2 353 aa17.56■□□□□ 0.4
AC013402.3-201ENST00000438566 RBM42Q9BTD8 480 aaKnown RBP17.5■□□□□ 0.39
AC013402.3-201ENST00000438566 PABPN1Q86U42 306 aaKnown RBP eCLIP17.4■□□□□ 0.38
AC013402.3-201ENST00000438566 FBXO3Q9UK99 471 aa17.38■□□□□ 0.37
AC013402.3-201ENST00000438566 AKT1S1Q96B36 256 aa17.33■□□□□ 0.36
AC013402.3-201ENST00000438566 STAG3Q9UJ98 1225 aa17.17■□□□□ 0.34
AC013402.3-201ENST00000438566 REM2Q8IYK8 340 aaPredicted RBP17.16■□□□□ 0.34
AC013402.3-201ENST00000438566 VASPP50552 380 aaPredicted RBP17.12■□□□□ 0.33
AC013402.3-201ENST00000438566 SPDYE1Q8NFV5 336 aaPredicted RBP17.1■□□□□ 0.33
AC013402.3-201ENST00000438566 CLEC11AQ9Y240 323 aa17.01■□□□□ 0.31
AC013402.3-201ENST00000438566 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.3
AC013402.3-201ENST00000438566 PITPNM1O00562 1244 aa16.95■□□□□ 0.3
AC013402.3-201ENST00000438566 IFNLR1Q8IU57 520 aaPredicted RBP16.91■□□□□ 0.3
AC013402.3-201ENST00000438566 PRR29P0C7W0 189 aa16.9■□□□□ 0.3
AC013402.3-201ENST00000438566 MIER1Q8N108 512 aa16.9■□□□□ 0.3
AC013402.3-201ENST00000438566 PLCD3Q8N3E9 789 aa16.9■□□□□ 0.3
AC013402.3-201ENST00000438566 PLEKHG5O94827 1062 aa16.81■□□□□ 0.28
AC013402.3-201ENST00000438566 AMER1Q5JTC6 1135 aaPredicted RBP16.81■□□□□ 0.28
AC013402.3-201ENST00000438566 KLHL34Q8N239 644 aa16.77■□□□□ 0.28
AC013402.3-201ENST00000438566 RTN4Q9NQC3 1192 aaKnown RBP16.75■□□□□ 0.27
AC013402.3-201ENST00000438566 CREBZFQ9NS37 354 aa16.73■□□□□ 0.27
AC013402.3-201ENST00000438566 ZBTB47Q9UFB7 747 aaPredicted RBP16.71■□□□□ 0.27
AC013402.3-201ENST00000438566 CHRDL2Q6WN34 429 aa16.68■□□□□ 0.26
AC013402.3-201ENST00000438566 SPOCK2Q92563 424 aa16.67■□□□□ 0.26
AC013402.3-201ENST00000438566 FXR2P51116 673 aaKnown RBP eCLIP16.61■□□□□ 0.25
AC013402.3-201ENST00000438566 MNX1P50219 401 aaPredicted RBP16.58■□□□□ 0.24
AC013402.3-201ENST00000438566 CHADLQ6NUI6 762 aa16.57■□□□□ 0.24
AC013402.3-201ENST00000438566 PRKAR2AP13861 404 aaKnown RBP16.54■□□□□ 0.24
AC013402.3-201ENST00000438566 PIP4P2Q8N4L2 257 aa16.52■□□□□ 0.24
AC013402.3-201ENST00000438566 NPM1P06748 294 aaKnown RBP eCLIP16.46■□□□□ 0.23
AC013402.3-201ENST00000438566 NUBP1P53384 320 aa16.45■□□□□ 0.22
AC013402.3-201ENST00000438566 FARP1Q9Y4F1 1045 aaPredicted RBP16.45■□□□□ 0.22
AC013402.3-201ENST00000438566 PKD2Q13563 968 aa16.41■□□□□ 0.22
AC013402.3-201ENST00000438566 CIZ1Q9ULV3 898 aaPredicted RBP16.37■□□□□ 0.21
AC013402.3-201ENST00000438566 GSE1Q14687 1217 aa16.33■□□□□ 0.2
AC013402.3-201ENST00000438566 RASEFQ8IZ41 740 aa16.33■□□□□ 0.2
AC013402.3-201ENST00000438566 DCAF8Q5TAQ9 597 aa16.31■□□□□ 0.2
AC013402.3-201ENST00000438566 FAM212AQ96EL1 285 aa16.31■□□□□ 0.2
AC013402.3-201ENST00000438566 ECM2O94769 699 aaPredicted RBP16.27■□□□□ 0.2
AC013402.3-201ENST00000438566 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms