RNA–Protein interactions for RNA: ENST00000424214.5

GPN1-203, Transcript of GPN-loop GTPase 1, humanhuman

TSL 2 BASIC

Gene GPN1, Length 1,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-203ENST00000424214 CHIC1Q5VXU3 224 aa14.04□□□□□ -0.16
GPN1-203ENST00000424214 AEBP2Q6ZN18 517 aaPredicted RBP14.02□□□□□ -0.16
GPN1-203ENST00000424214 NISCHQ9Y2I1 1504 aa13.17□□□□□ -0.3
GPN1-203ENST00000424214 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
GPN1-203ENST00000424214 MYT1Q01538 1121 aa12.62□□□□□ -0.39
GPN1-203ENST00000424214 HRCP23327 699 aa12.57□□□□□ -0.4
GPN1-203ENST00000424214 PHF23Q9BUL5 403 aaPredicted RBP12.54□□□□□ -0.4
GPN1-203ENST00000424214 PPARGC1BQ86YN6 1023 aaKnown RBP12.01□□□□□ -0.49
GPN1-203ENST00000424214 CCDC180Q9P1Z9 1646 aa12□□□□□ -0.49
GPN1-203ENST00000424214 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
GPN1-203ENST00000424214 DCAF1Q9Y4B6 1507 aa11.98□□□□□ -0.49
GPN1-203ENST00000424214 MYO15BQ96JP2 1530 aa11.98□□□□□ -0.49
GPN1-203ENST00000424214 SCAF1Q9H7N4 1312 aaKnown RBP11.96□□□□□ -0.49
GPN1-203ENST00000424214 PCGF6Q9BYE7 350 aa11.95□□□□□ -0.5
GPN1-203ENST00000424214 ZEB1P37275 1124 aaPredicted RBP11.87□□□□□ -0.51
GPN1-203ENST00000424214 POTEDQ86YR6 584 aa11.77□□□□□ -0.52
GPN1-203ENST00000424214 TRIM26Q12899 539 aaPredicted RBP11.69□□□□□ -0.54
GPN1-203ENST00000424214 ACIN1Q9UKV3 1341 aaKnown RBP11.68□□□□□ -0.54
GPN1-203ENST00000424214 CENPBP07199 599 aaPredicted RBP11.58□□□□□ -0.56
GPN1-203ENST00000424214 SUPT5HO00267 1087 aaKnown RBP11.57□□□□□ -0.56
GPN1-203ENST00000424214 SENP3Q9H4L4 574 aaPredicted RBP11.57□□□□□ -0.56
GPN1-203ENST00000424214 PLPPR3Q6T4P5 718 aa11.54□□□□□ -0.56
GPN1-203ENST00000424214 NEUROD1Q13562 356 aa11.5□□□□□ -0.57
GPN1-203ENST00000424214 SHROOM4Q9ULL8 1493 aa11.49□□□□□ -0.57
GPN1-203ENST00000424214 GTF3C3Q9Y5Q9 886 aa11.49□□□□□ -0.57
GPN1-203ENST00000424214 BCL11AQ9H165 835 aa11.38□□□□□ -0.59
GPN1-203ENST00000424214 ZCCHC6Q5VYS8 1495 aaKnown RBP11.33□□□□□ -0.6
GPN1-203ENST00000424214 CLSPNQ9HAW4 1339 aa11.27□□□□□ -0.61
GPN1-203ENST00000424214 DIEXFQ68CQ4 756 aaKnown RBP11.25□□□□□ -0.61
GPN1-203ENST00000424214 ANP32EQ9BTT0 268 aa11.24□□□□□ -0.61
GPN1-203ENST00000424214 LOC105371045A0A1W2PR82 267 aa11.23□□□□□ -0.61
GPN1-203ENST00000424214 FAM9AQ8IZU1 332 aaPredicted RBP11.21□□□□□ -0.62
GPN1-203ENST00000424214 PRKCSHP14314 528 aaPredicted RBP11.2□□□□□ -0.62
GPN1-203ENST00000424214 ERICH6Q7L0X2 663 aa11.2□□□□□ -0.62
GPN1-203ENST00000424214 TRIM41Q8WV44 630 aa11.1□□□□□ -0.63
GPN1-203ENST00000424214 APLP2Q06481 763 aa11.05□□□□□ -0.64
GPN1-203ENST00000424214 CCER1Q8TC90 406 aaPredicted RBP11.05□□□□□ -0.64
GPN1-203ENST00000424214 ADRA2BP18089 450 aa11.02□□□□□ -0.65
GPN1-203ENST00000424214 ZNF316A6NFI3 1004 aaPredicted RBP11.01□□□□□ -0.65
GPN1-203ENST00000424214 CSRNP3Q8WYN3 585 aa10.98□□□□□ -0.65
GPN1-203ENST00000424214 TSHZ2Q9NRE2 1034 aa10.95□□□□□ -0.66
GPN1-203ENST00000424214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.95□□□□□ -0.66
GPN1-203ENST00000424214 YTHDC1Q96MU7 727 aaKnown RBP10.92□□□□□ -0.66
GPN1-203ENST00000424214 SUPT16HQ9Y5B9 1047 aaKnown RBP10.92□□□□□ -0.66
GPN1-203ENST00000424214 PPP6R1Q9UPN7 881 aa10.9□□□□□ -0.66
GPN1-203ENST00000424214 ABCC9O60706 1549 aa10.9□□□□□ -0.66
GPN1-203ENST00000424214 MYT1LQ9UL68 1186 aa10.87□□□□□ -0.67
GPN1-203ENST00000424214 MIER1Q8N108 512 aa10.84□□□□□ -0.67
GPN1-203ENST00000424214 WRNQ14191 1432 aaPredicted RBP eCLIP10.83□□□□□ -0.68
GPN1-203ENST00000424214 FOXD1Q16676 465 aa10.82□□□□□ -0.68
GPN1-203ENST00000424214 RB1CC1Q8TDY2 1594 aa10.76□□□□□ -0.69
GPN1-203ENST00000424214 KCNA4P22459 653 aa10.75□□□□□ -0.69
GPN1-203ENST00000424214 ERICH6BQ5W0A0 696 aa10.69□□□□□ -0.7
GPN1-203ENST00000424214 RBM19Q9Y4C8 960 aaKnown RBP10.66□□□□□ -0.7
GPN1-203ENST00000424214 FANCIQ9NVI1 1328 aa10.65□□□□□ -0.7
GPN1-203ENST00000424214 EHMT2Q96KQ7 1210 aa10.61□□□□□ -0.71
GPN1-203ENST00000424214 RSF1Q96T23 1441 aaPredicted RBP10.6□□□□□ -0.71
GPN1-203ENST00000424214 SLC24A1O60721 1099 aa10.57□□□□□ -0.72
GPN1-203ENST00000424214 UBE2Q2Q8WVN8 375 aa10.56□□□□□ -0.72
GPN1-203ENST00000424214 CEP162Q5TB80 1403 aa10.56□□□□□ -0.72
GPN1-203ENST00000424214 NEFLP07196 543 aa10.55□□□□□ -0.72
GPN1-203ENST00000424214 MSH5O43196 834 aa10.55□□□□□ -0.72
GPN1-203ENST00000424214 EIF4G1Q04637 1599 aaKnown RBP10.54□□□□□ -0.72
GPN1-203ENST00000424214 DEKP35659 375 aaKnown RBP10.54□□□□□ -0.72
GPN1-203ENST00000424214 ANO8Q9HCE9 1232 aaPredicted RBP10.51□□□□□ -0.73
GPN1-203ENST00000424214 TNIKQ9UKE5 1360 aa10.51□□□□□ -0.73
GPN1-203ENST00000424214 FKBP8Q14318 412 aa10.5□□□□□ -0.73
GPN1-203ENST00000424214 EEA1Q15075 1411 aa10.47□□□□□ -0.73
GPN1-203ENST00000424214 BCANQ96GW7 911 aa10.47□□□□□ -0.73
GPN1-203ENST00000424214 CDK11AQ9UQ88 783 aaPredicted RBP10.42□□□□□ -0.74
GPN1-203ENST00000424214 SALL2Q9Y467 1007 aaPredicted RBP10.4□□□□□ -0.74
GPN1-203ENST00000424214 DCAF8L2P0C7V8 631 aa10.39□□□□□ -0.75
GPN1-203ENST00000424214 BAZ1AQ9NRL2 1556 aaPredicted RBP10.39□□□□□ -0.75
GPN1-203ENST00000424214 GOLGA3Q08378 1498 aa10.38□□□□□ -0.75
GPN1-203ENST00000424214 DAXXQ9UER7 740 aaPredicted RBP10.37□□□□□ -0.75
GPN1-203ENST00000424214 DHX57Q6P158 1386 aaKnown RBP10.37□□□□□ -0.75
GPN1-203ENST00000424214 NACADO15069 1562 aa10.35□□□□□ -0.75
GPN1-203ENST00000424214 KIF21BO75037 1637 aa10.35□□□□□ -0.75
GPN1-203ENST00000424214 CCER2I3L3R5 266 aa10.33□□□□□ -0.76
GPN1-203ENST00000424214 NOP58Q9Y2X3 529 aaKnown RBP10.33□□□□□ -0.76
GPN1-203ENST00000424214 SCRIBQ14160 1630 aa10.32□□□□□ -0.76
GPN1-203ENST00000424214 CUX2O14529 1486 aa10.32□□□□□ -0.76
GPN1-203ENST00000424214 EIF5BO60841 1220 aaKnown RBP10.32□□□□□ -0.76
GPN1-203ENST00000424214 HNRNPUL2Q1KMD3 747 aaKnown RBP10.32□□□□□ -0.76
GPN1-203ENST00000424214 RTL5Q5HYW3 569 aaPredicted RBP10.32□□□□□ -0.76
GPN1-203ENST00000424214 ABCC8Q09428 1581 aa10.31□□□□□ -0.76
GPN1-203ENST00000424214 ITGAEP38570 1179 aa10.3□□□□□ -0.76
GPN1-203ENST00000424214 VPS8Q8N3P4 1428 aa10.3□□□□□ -0.76
GPN1-203ENST00000424214 PPP4R3CPQ6ZMV5 832 aa10.3□□□□□ -0.76
GPN1-203ENST00000424214 WIZO95785 1651 aa10.28□□□□□ -0.76
GPN1-203ENST00000424214 PIAS4Q8N2W9 510 aaPredicted RBP10.26□□□□□ -0.77
GPN1-203ENST00000424214 CCDC136Q96JN2 1154 aa10.26□□□□□ -0.77
GPN1-203ENST00000424214 BAZ1BQ9UIG0 1483 aaKnown RBP10.25□□□□□ -0.77
GPN1-203ENST00000424214 C11orf95C9JLR9 678 aaPredicted RBP10.25□□□□□ -0.77
GPN1-203ENST00000424214 PKNOX2Q96KN3 472 aa10.25□□□□□ -0.77
GPN1-203ENST00000424214 CCDC88BA6NC98 1476 aa10.25□□□□□ -0.77
GPN1-203ENST00000424214 CEP164Q9UPV0 1460 aa10.25□□□□□ -0.77
GPN1-203ENST00000424214 KCNH8Q96L42 1107 aa10.24□□□□□ -0.77
GPN1-203ENST00000424214 PPP4R2Q9NY27 417 aa10.23□□□□□ -0.77
GPN1-203ENST00000424214 MROH2BQ7Z745 1585 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms