Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 CLDN8-201ENST00000399899 2068 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 LRRC4C-203ENST00000528697 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 UBE2U-206ENST00000611228 1550 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 AC093392.1-201ENST00000366280 340 ntBASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 FTH1P3-201ENST00000394290 584 ntBASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 TBL1YP1-201ENST00000440297 1026 ntBASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 CYP4F25P-201ENST00000446871 520 ntBASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 C3orf52-204ENST00000480282 1080 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 RPL7AP2-201ENST00000496515 740 ntBASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 CCDC58P5-201ENST00000536923 432 ntBASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 AL357093.1-201ENST00000556926 458 ntTSL 2 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 AC034105.2-201ENST00000561866 238 ntBASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 AC074051.4-201ENST00000564888 892 ntBASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 SLC6A21P-201ENST00000599458 369 ntBASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 AL356052.1-201ENST00000605764 376 ntBASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 LINC01002-216ENST00000632351 572 ntTSL 5 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 AC106800.1-201ENST00000501221 1362 ntBASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 AC093117.1-201ENST00000413541 2171 ntTSL 2 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 TCF4-241ENST00000568740 2628 ntTSL 5 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 LINC01856-201ENST00000450840 2398 ntTSL 2 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 BCL9P1-201ENST00000506012 2561 ntBASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 PPP2R3A-205ENST00000490467 1782 ntTSL 2 BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPIPA3F8WFD2 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 LINC01725-205ENST00000457273 1991 ntTSL 2 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 U3.18-201ENST00000390880 216 ntBASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 SLC25A5P2-201ENST00000413713 897 ntBASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 HCG21-204ENST00000419481 605 ntTSL 3 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 TRIM43CP-201ENST00000422468 1028 ntBASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 RANP5-201ENST00000427731 655 ntBASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 AC073475.1-201ENST00000434012 592 ntBASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 PSPC1P1-201ENST00000442352 665 ntBASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 AL034397.1-201ENST00000456392 908 ntBASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 AC017007.3-201ENST00000479865 435 ntBASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 RN7SL862P-201ENST00000491550 298 ntBASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 STXBP6-204ENST00000546511 1223 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 AP001021.2-201ENST00000577935 544 ntTSL 5 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 AC087393.2-201ENST00000580962 504 ntTSL 3 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 AC004477.2-201ENST00000583349 192 ntTSL 3 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 AC087393.3-201ENST00000584971 166 ntBASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 MAGEB3-202ENST00000620842 1129 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 AC090099.1-204ENST00000623626 849 ntBASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 GLRX-202ENST00000379979 1366 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NPIPA3F8WFD2 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms