RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 NISCHQ9Y2I1 1504 aa18.62■□□□□ 0.57
TCF4-241ENST00000568740 CHIC1Q5VXU3 224 aa16.54■□□□□ 0.24
TCF4-241ENST00000568740 SLC24A1O60721 1099 aa16.49■□□□□ 0.23
TCF4-241ENST00000568740 DCAF8L2P0C7V8 631 aa15.99■□□□□ 0.15
TCF4-241ENST00000568740 CCDC180Q9P1Z9 1646 aa15.88■□□□□ 0.13
TCF4-241ENST00000568740 SHROOM4Q9ULL8 1493 aa15.85■□□□□ 0.13
TCF4-241ENST00000568740 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
TCF4-241ENST00000568740 ZCCHC6Q5VYS8 1495 aaKnown RBP15.61■□□□□ 0.09
TCF4-241ENST00000568740 AEBP2Q6ZN18 517 aaPredicted RBP15.58■□□□□ 0.08
TCF4-241ENST00000568740 ABCC9O60706 1549 aa15.49■□□□□ 0.07
TCF4-241ENST00000568740 SUPT5HO00267 1087 aaKnown RBP15.31■□□□□ 0.04
TCF4-241ENST00000568740 PLPPR3Q6T4P5 718 aa15.26■□□□□ 0.03
TCF4-241ENST00000568740 DCAF1Q9Y4B6 1507 aa15.12■□□□□ 0.01
TCF4-241ENST00000568740 RTN4Q9NQC3 1192 aaKnown RBP15.1■□□□□ 0.01
TCF4-241ENST00000568740 SCRIBQ14160 1630 aa15.06■□□□□ 0
TCF4-241ENST00000568740 PHF23Q9BUL5 403 aaPredicted RBP14.97□□□□□ -0.01
TCF4-241ENST00000568740 NACADO15069 1562 aa14.88□□□□□ -0.03
TCF4-241ENST00000568740 MYO15BQ96JP2 1530 aa14.83□□□□□ -0.03
TCF4-241ENST00000568740 PABPN1Q86U42 306 aaKnown RBP eCLIP14.83□□□□□ -0.03
TCF4-241ENST00000568740 RB1CC1Q8TDY2 1594 aa14.78□□□□□ -0.04
TCF4-241ENST00000568740 DAXXQ9UER7 740 aaPredicted RBP14.72□□□□□ -0.05
TCF4-241ENST00000568740 CECR2Q9BXF3 1484 aa14.69□□□□□ -0.06
TCF4-241ENST00000568740 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
TCF4-241ENST00000568740 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
TCF4-241ENST00000568740 KCNA4P22459 653 aa14.67□□□□□ -0.06
TCF4-241ENST00000568740 AMER1Q5JTC6 1135 aaPredicted RBP14.67□□□□□ -0.06
TCF4-241ENST00000568740 RSF1Q96T23 1441 aaPredicted RBP14.62□□□□□ -0.07
TCF4-241ENST00000568740 MROH2BQ7Z745 1585 aa14.53□□□□□ -0.08
TCF4-241ENST00000568740 UNC13AQ9UPW8 1703 aa14.53□□□□□ -0.08
TCF4-241ENST00000568740 BICRAQ9NZM4 1560 aa14.43□□□□□ -0.1
TCF4-241ENST00000568740 WIZO95785 1651 aa14.41□□□□□ -0.1
TCF4-241ENST00000568740 PRKCSHP14314 528 aaPredicted RBP14.39□□□□□ -0.11
TCF4-241ENST00000568740 BAZ1AQ9NRL2 1556 aaPredicted RBP14.3□□□□□ -0.12
TCF4-241ENST00000568740 SMARCA4P51532 1647 aa14.25□□□□□ -0.13
TCF4-241ENST00000568740 FAM9AQ8IZU1 332 aaPredicted RBP14.23□□□□□ -0.13
TCF4-241ENST00000568740 LOC105371045A0A1W2PR82 267 aa14.2□□□□□ -0.14
TCF4-241ENST00000568740 TRIM41Q8WV44 630 aa14.2□□□□□ -0.14
TCF4-241ENST00000568740 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
TCF4-241ENST00000568740 TOP2AP11388 1531 aaKnown RBP14.08□□□□□ -0.16
TCF4-241ENST00000568740 ATAD2BQ9ULI0 1458 aa14.07□□□□□ -0.16
TCF4-241ENST00000568740 TIMELESSQ9UNS1 1208 aa14.02□□□□□ -0.17
TCF4-241ENST00000568740 SMARCA2P51531 1590 aa14.02□□□□□ -0.17
TCF4-241ENST00000568740 BAZ1BQ9UIG0 1483 aaKnown RBP14.01□□□□□ -0.17
TCF4-241ENST00000568740 EIF4G1Q04637 1599 aaKnown RBP14.01□□□□□ -0.17
TCF4-241ENST00000568740 ABCC8Q09428 1581 aa13.97□□□□□ -0.17
TCF4-241ENST00000568740 ARXQ96QS3 562 aa13.97□□□□□ -0.17
TCF4-241ENST00000568740 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
TCF4-241ENST00000568740 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
TCF4-241ENST00000568740 PEG3Q9GZU2 1588 aa13.91□□□□□ -0.18
TCF4-241ENST00000568740 TAOK2Q9UL54 1235 aa13.89□□□□□ -0.19
TCF4-241ENST00000568740 NCAPD3P42695 1498 aa13.84□□□□□ -0.19
TCF4-241ENST00000568740 CC2D2AQ9P2K1 1620 aa13.81□□□□□ -0.2
TCF4-241ENST00000568740 TULP1O00294 542 aaPredicted RBP13.81□□□□□ -0.2
TCF4-241ENST00000568740 SOGA1O94964 1423 aa13.78□□□□□ -0.2
TCF4-241ENST00000568740 RUSC2Q8N2Y8 1516 aa13.75□□□□□ -0.21
TCF4-241ENST00000568740 WRNQ14191 1432 aaPredicted RBP eCLIP13.74□□□□□ -0.21
TCF4-241ENST00000568740 HMGXB3Q12766 1538 aa13.72□□□□□ -0.21
TCF4-241ENST00000568740 PPARGC1BQ86YN6 1023 aaKnown RBP13.71□□□□□ -0.22
TCF4-241ENST00000568740 APLP2Q06481 763 aa13.7□□□□□ -0.22
TCF4-241ENST00000568740 BCANQ96GW7 911 aa13.7□□□□□ -0.22
TCF4-241ENST00000568740 RANGAP1P46060 587 aaPredicted RBP13.69□□□□□ -0.22
TCF4-241ENST00000568740 TPRNQ4KMQ1 711 aa13.68□□□□□ -0.22
TCF4-241ENST00000568740 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
TCF4-241ENST00000568740 PCGF6Q9BYE7 350 aa13.66□□□□□ -0.22
TCF4-241ENST00000568740 NESP48681 1621 aa13.64□□□□□ -0.23
TCF4-241ENST00000568740 UBTFP17480 764 aaKnown RBP13.64□□□□□ -0.23
TCF4-241ENST00000568740 CADPSQ9ULU8 1353 aa13.61□□□□□ -0.23
TCF4-241ENST00000568740 TTBK1Q5TCY1 1321 aaPredicted RBP13.61□□□□□ -0.23
TCF4-241ENST00000568740 CFTRP13569 1480 aa13.61□□□□□ -0.23
TCF4-241ENST00000568740 ADRA2BP18089 450 aa13.56□□□□□ -0.24
TCF4-241ENST00000568740 PLCB2Q00722 1185 aa13.56□□□□□ -0.24
TCF4-241ENST00000568740 HOMEZQ8IX15 550 aa13.56□□□□□ -0.24
TCF4-241ENST00000568740 CUX1P39880 1505 aa13.53□□□□□ -0.24
TCF4-241ENST00000568740 ZBTB22O15209 634 aa13.52□□□□□ -0.24
TCF4-241ENST00000568740 PELP1Q8IZL8 1130 aaKnown RBP13.52□□□□□ -0.24
TCF4-241ENST00000568740 FANCD2Q9BXW9 1451 aa13.48□□□□□ -0.25
TCF4-241ENST00000568740 TOP2BQ02880 1626 aa13.46□□□□□ -0.25
TCF4-241ENST00000568740 ERICH6Q7L0X2 663 aa13.44□□□□□ -0.26
TCF4-241ENST00000568740 HAP1P54257 671 aaPredicted RBP13.43□□□□□ -0.26
TCF4-241ENST00000568740 RAPGEF2Q9Y4G8 1499 aa13.42□□□□□ -0.26
TCF4-241ENST00000568740 CEP162Q5TB80 1403 aa13.4□□□□□ -0.26
TCF4-241ENST00000568740 RAD54L2Q9Y4B4 1467 aa13.4□□□□□ -0.26
TCF4-241ENST00000568740 FGD5Q6ZNL6 1462 aa13.39□□□□□ -0.27
TCF4-241ENST00000568740 EEA1Q15075 1411 aa13.39□□□□□ -0.27
TCF4-241ENST00000568740 CUX2O14529 1486 aa13.38□□□□□ -0.27
TCF4-241ENST00000568740 BIVM-ERCC5R4GMW8 1640 aa13.37□□□□□ -0.27
TCF4-241ENST00000568740 TNIKQ9UKE5 1360 aa13.36□□□□□ -0.27
TCF4-241ENST00000568740 GTF3C3Q9Y5Q9 886 aa13.36□□□□□ -0.27
TCF4-241ENST00000568740 GOLGA3Q08378 1498 aa13.36□□□□□ -0.27
TCF4-241ENST00000568740 TRIM26Q12899 539 aaPredicted RBP13.36□□□□□ -0.27
TCF4-241ENST00000568740 PODXL2Q9NZ53 605 aa13.35□□□□□ -0.27
TCF4-241ENST00000568740 KLHL34Q8N239 644 aa13.35□□□□□ -0.27
TCF4-241ENST00000568740 KIF27Q86VH2 1401 aa13.34□□□□□ -0.27
TCF4-241ENST00000568740 CEP164Q9UPV0 1460 aa13.33□□□□□ -0.28
TCF4-241ENST00000568740 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
TCF4-241ENST00000568740 URB2Q14146 1524 aaKnown RBP13.31□□□□□ -0.28
TCF4-241ENST00000568740 TOPBP1Q92547 1522 aa13.31□□□□□ -0.28
TCF4-241ENST00000568740 MYT1Q01538 1121 aa13.3□□□□□ -0.28
TCF4-241ENST00000568740 IGF1RP08069 1367 aa13.3□□□□□ -0.28
TCF4-241ENST00000568740 PDS5BQ9NTI5 1447 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 217 ms