RNA–Protein interactions for RNA: ENST00000442352.1

PSPC1P1-201, Transcript of paraspeckle component 1 pseudogene 1, humanhuman

BASIC

Gene PSPC1P1, Length 665 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1P1-201ENST00000442352 CHIC1Q5VXU3 224 aa19.69■□□□□ 0.74
PSPC1P1-201ENST00000442352 AEBP2Q6ZN18 517 aaPredicted RBP19.22■□□□□ 0.67
PSPC1P1-201ENST00000442352 NISCHQ9Y2I1 1504 aa17.96■□□□□ 0.47
PSPC1P1-201ENST00000442352 PHF23Q9BUL5 403 aaPredicted RBP17.33■□□□□ 0.36
PSPC1P1-201ENST00000442352 PLPPR3Q6T4P5 718 aa16.42■□□□□ 0.22
PSPC1P1-201ENST00000442352 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
PSPC1P1-201ENST00000442352 CCDC180Q9P1Z9 1646 aa15.54■□□□□ 0.08
PSPC1P1-201ENST00000442352 ADRA2BP18089 450 aa15.23■□□□□ 0.03
PSPC1P1-201ENST00000442352 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
PSPC1P1-201ENST00000442352 KCNA4P22459 653 aa15.14■□□□□ 0.01
PSPC1P1-201ENST00000442352 ZCCHC6Q5VYS8 1495 aaKnown RBP15.14■□□□□ 0.01
PSPC1P1-201ENST00000442352 PPP6R1Q9UPN7 881 aa15□□□□□ -0.01
PSPC1P1-201ENST00000442352 FOXD1Q16676 465 aa14.93□□□□□ -0.02
PSPC1P1-201ENST00000442352 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
PSPC1P1-201ENST00000442352 SHROOM4Q9ULL8 1493 aa14.83□□□□□ -0.03
PSPC1P1-201ENST00000442352 DCAF8L2P0C7V8 631 aa14.77□□□□□ -0.05
PSPC1P1-201ENST00000442352 MYO15BQ96JP2 1530 aa14.63□□□□□ -0.07
PSPC1P1-201ENST00000442352 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
PSPC1P1-201ENST00000442352 CSRNP3Q8WYN3 585 aa14.57□□□□□ -0.08
PSPC1P1-201ENST00000442352 SUPT5HO00267 1087 aaKnown RBP14.54□□□□□ -0.08
PSPC1P1-201ENST00000442352 PPP4R3CPQ6ZMV5 832 aa14.54□□□□□ -0.08
PSPC1P1-201ENST00000442352 NCBP3Q53F19 620 aaKnown RBP14.49□□□□□ -0.09
PSPC1P1-201ENST00000442352 NACADO15069 1562 aa14.43□□□□□ -0.1
PSPC1P1-201ENST00000442352 PIAS4Q8N2W9 510 aaPredicted RBP14.36□□□□□ -0.11
PSPC1P1-201ENST00000442352 ABCC9O60706 1549 aa14.28□□□□□ -0.12
PSPC1P1-201ENST00000442352 SCRIBQ14160 1630 aa14.24□□□□□ -0.13
PSPC1P1-201ENST00000442352 RB1CC1Q8TDY2 1594 aa14.21□□□□□ -0.14
PSPC1P1-201ENST00000442352 NPM3O75607 178 aaKnown RBP14.18□□□□□ -0.14
PSPC1P1-201ENST00000442352 RSF1Q96T23 1441 aaPredicted RBP14.05□□□□□ -0.16
PSPC1P1-201ENST00000442352 CNKSR2Q8WXI2 1034 aa13.97□□□□□ -0.17
PSPC1P1-201ENST00000442352 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
PSPC1P1-201ENST00000442352 ZBTB22O15209 634 aa13.9□□□□□ -0.18
PSPC1P1-201ENST00000442352 BAZ1AQ9NRL2 1556 aaPredicted RBP13.89□□□□□ -0.19
PSPC1P1-201ENST00000442352 CECR2Q9BXF3 1484 aa13.83□□□□□ -0.2
PSPC1P1-201ENST00000442352 MROH2BQ7Z745 1585 aa13.82□□□□□ -0.2
PSPC1P1-201ENST00000442352 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
PSPC1P1-201ENST00000442352 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
PSPC1P1-201ENST00000442352 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
PSPC1P1-201ENST00000442352 WIZO95785 1651 aa13.72□□□□□ -0.21
PSPC1P1-201ENST00000442352 SMARCA4P51532 1647 aa13.72□□□□□ -0.21
PSPC1P1-201ENST00000442352 TOP2AP11388 1531 aaKnown RBP13.68□□□□□ -0.22
PSPC1P1-201ENST00000442352 DNAJC5BQ9UF47 199 aa13.66□□□□□ -0.22
PSPC1P1-201ENST00000442352 SLC24A1O60721 1099 aa13.65□□□□□ -0.22
PSPC1P1-201ENST00000442352 BICRAQ9NZM4 1560 aa13.61□□□□□ -0.23
PSPC1P1-201ENST00000442352 AMER1Q5JTC6 1135 aaPredicted RBP13.58□□□□□ -0.24
PSPC1P1-201ENST00000442352 PEG3Q9GZU2 1588 aa13.56□□□□□ -0.24
PSPC1P1-201ENST00000442352 PABPN1Q86U42 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
PSPC1P1-201ENST00000442352 MSH5O43196 834 aa13.53□□□□□ -0.24
PSPC1P1-201ENST00000442352 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
PSPC1P1-201ENST00000442352 LOC105371045A0A1W2PR82 267 aa13.51□□□□□ -0.25
PSPC1P1-201ENST00000442352 SMARCA2P51531 1590 aa13.5□□□□□ -0.25
PSPC1P1-201ENST00000442352 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
PSPC1P1-201ENST00000442352 EIF4G1Q04637 1599 aaKnown RBP13.47□□□□□ -0.25
PSPC1P1-201ENST00000442352 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
PSPC1P1-201ENST00000442352 ATAD2BQ9ULI0 1458 aa13.41□□□□□ -0.26
PSPC1P1-201ENST00000442352 BAZ1BQ9UIG0 1483 aaKnown RBP13.4□□□□□ -0.26
PSPC1P1-201ENST00000442352 EEA1Q15075 1411 aa13.39□□□□□ -0.27
PSPC1P1-201ENST00000442352 MAPK8IP2Q13387 824 aaPredicted RBP13.39□□□□□ -0.27
PSPC1P1-201ENST00000442352 TRIM26Q12899 539 aaPredicted RBP13.38□□□□□ -0.27
PSPC1P1-201ENST00000442352 FAM9AQ8IZU1 332 aaPredicted RBP13.38□□□□□ -0.27
PSPC1P1-201ENST00000442352 PCGF6Q9BYE7 350 aa13.37□□□□□ -0.27
PSPC1P1-201ENST00000442352 HRCP23327 699 aa13.31□□□□□ -0.28
PSPC1P1-201ENST00000442352 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
PSPC1P1-201ENST00000442352 NCAPD3P42695 1498 aa13.28□□□□□ -0.28
PSPC1P1-201ENST00000442352 ABCC8Q09428 1581 aa13.28□□□□□ -0.28
PSPC1P1-201ENST00000442352 WRNQ14191 1432 aaPredicted RBP eCLIP13.27□□□□□ -0.29
PSPC1P1-201ENST00000442352 ATXN8OSP0DMR3 200 aa13.22□□□□□ -0.29
PSPC1P1-201ENST00000442352 ZEB1P37275 1124 aaPredicted RBP13.19□□□□□ -0.3
PSPC1P1-201ENST00000442352 FKBP8Q14318 412 aa13.18□□□□□ -0.3
PSPC1P1-201ENST00000442352 TNIKQ9UKE5 1360 aa13.18□□□□□ -0.3
PSPC1P1-201ENST00000442352 HOXD11P31277 338 aaPredicted RBP13.17□□□□□ -0.3
PSPC1P1-201ENST00000442352 MYCNP04198 464 aaPredicted RBP13.15□□□□□ -0.3
PSPC1P1-201ENST00000442352 SLC4A2P04920 1241 aa13.14□□□□□ -0.31
PSPC1P1-201ENST00000442352 GOLGA3Q08378 1498 aa13.14□□□□□ -0.31
PSPC1P1-201ENST00000442352 SOGA1O94964 1423 aa13.13□□□□□ -0.31
PSPC1P1-201ENST00000442352 CEP164Q9UPV0 1460 aa13.11□□□□□ -0.31
PSPC1P1-201ENST00000442352 DMRT2Q9Y5R5 561 aa13.11□□□□□ -0.31
PSPC1P1-201ENST00000442352 UBTFP17480 764 aaKnown RBP13.1□□□□□ -0.31
PSPC1P1-201ENST00000442352 SYNJ1O43426 1573 aa13.1□□□□□ -0.31
PSPC1P1-201ENST00000442352 TOP2BQ02880 1626 aa13.1□□□□□ -0.31
PSPC1P1-201ENST00000442352 KIF21BO75037 1637 aa13.09□□□□□ -0.31
PSPC1P1-201ENST00000442352 CEP162Q5TB80 1403 aa13.07□□□□□ -0.32
PSPC1P1-201ENST00000442352 BIVM-ERCC5R4GMW8 1640 aa13.06□□□□□ -0.32
PSPC1P1-201ENST00000442352 CFTRP13569 1480 aa13.06□□□□□ -0.32
PSPC1P1-201ENST00000442352 PRDM2Q13029 1718 aa13.02□□□□□ -0.33
PSPC1P1-201ENST00000442352 RUSC2Q8N2Y8 1516 aa13□□□□□ -0.33
PSPC1P1-201ENST00000442352 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
PSPC1P1-201ENST00000442352 KIF27Q86VH2 1401 aa12.96□□□□□ -0.33
PSPC1P1-201ENST00000442352 ERICH3Q5RHP9 1530 aa12.95□□□□□ -0.34
PSPC1P1-201ENST00000442352 APLP2Q06481 763 aa12.94□□□□□ -0.34
PSPC1P1-201ENST00000442352 CC2D2AQ9P2K1 1620 aa12.94□□□□□ -0.34
PSPC1P1-201ENST00000442352 CLIP1P30622 1438 aa12.93□□□□□ -0.34
PSPC1P1-201ENST00000442352 CUX1P39880 1505 aa12.91□□□□□ -0.34
PSPC1P1-201ENST00000442352 PRXQ9BXM0 1461 aa12.87□□□□□ -0.35
PSPC1P1-201ENST00000442352 VPS8Q8N3P4 1428 aa12.87□□□□□ -0.35
PSPC1P1-201ENST00000442352 RAPGEF2Q9Y4G8 1499 aa12.86□□□□□ -0.35
PSPC1P1-201ENST00000442352 PPARGC1BQ86YN6 1023 aaKnown RBP12.82□□□□□ -0.36
PSPC1P1-201ENST00000442352 FANCD2Q9BXW9 1451 aa12.8□□□□□ -0.36
PSPC1P1-201ENST00000442352 CCER1Q8TC90 406 aaPredicted RBP12.79□□□□□ -0.36
PSPC1P1-201ENST00000442352 LAMC3Q9Y6N6 1575 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms