RNA–Protein interactions for RNA: ENST00000450840.1

LINC01856-201, Transcript of long intergenic non-protein coding RNA 1856, humanhuman

TSL 2 BASIC

Gene LINC01856, Length 2,398 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01856-201ENST00000450840 NISCHQ9Y2I1 1504 aa19.51■□□□□ 0.71
LINC01856-201ENST00000450840 CHIC1Q5VXU3 224 aa18.64■□□□□ 0.57
LINC01856-201ENST00000450840 AEBP2Q6ZN18 517 aaPredicted RBP18.19■□□□□ 0.5
LINC01856-201ENST00000450840 CCDC180Q9P1Z9 1646 aa16.98■□□□□ 0.31
LINC01856-201ENST00000450840 PHF23Q9BUL5 403 aaPredicted RBP16.67■□□□□ 0.26
LINC01856-201ENST00000450840 ABCC9O60706 1549 aa16.47■□□□□ 0.23
LINC01856-201ENST00000450840 DCAF8L2P0C7V8 631 aa16.4■□□□□ 0.22
LINC01856-201ENST00000450840 ZCCHC6Q5VYS8 1495 aaKnown RBP16.35■□□□□ 0.21
LINC01856-201ENST00000450840 SHROOM4Q9ULL8 1493 aa16.06■□□□□ 0.16
LINC01856-201ENST00000450840 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
LINC01856-201ENST00000450840 NACADO15069 1562 aa15.88■□□□□ 0.13
LINC01856-201ENST00000450840 MYO15BQ96JP2 1530 aa15.83■□□□□ 0.12
LINC01856-201ENST00000450840 SCRIBQ14160 1630 aa15.82■□□□□ 0.12
LINC01856-201ENST00000450840 RB1CC1Q8TDY2 1594 aa15.81■□□□□ 0.12
LINC01856-201ENST00000450840 UNC13AQ9UPW8 1703 aa15.62■□□□□ 0.09
LINC01856-201ENST00000450840 PLPPR3Q6T4P5 718 aa15.57■□□□□ 0.08
LINC01856-201ENST00000450840 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
LINC01856-201ENST00000450840 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
LINC01856-201ENST00000450840 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
LINC01856-201ENST00000450840 SUPT5HO00267 1087 aaKnown RBP15.31■□□□□ 0.04
LINC01856-201ENST00000450840 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
LINC01856-201ENST00000450840 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
LINC01856-201ENST00000450840 RSF1Q96T23 1441 aaPredicted RBP15.12■□□□□ 0.01
LINC01856-201ENST00000450840 SMARCA4P51532 1647 aa15.05■□□□□ -0
LINC01856-201ENST00000450840 BAZ1AQ9NRL2 1556 aaPredicted RBP15.04■□□□□ -0
LINC01856-201ENST00000450840 WIZO95785 1651 aa15.04■□□□□ -0
LINC01856-201ENST00000450840 SENP3Q9H4L4 574 aaPredicted RBP15.02□□□□□ -0.01
LINC01856-201ENST00000450840 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
LINC01856-201ENST00000450840 KCNA4P22459 653 aa14.98□□□□□ -0.01
LINC01856-201ENST00000450840 ATAD2BQ9ULI0 1458 aa14.85□□□□□ -0.03
LINC01856-201ENST00000450840 CC2D2AQ9P2K1 1620 aa14.83□□□□□ -0.04
LINC01856-201ENST00000450840 ADRA2BP18089 450 aa14.81□□□□□ -0.04
LINC01856-201ENST00000450840 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
LINC01856-201ENST00000450840 DNAJC5BQ9UF47 199 aa14.77□□□□□ -0.04
LINC01856-201ENST00000450840 SMARCA2P51531 1590 aa14.76□□□□□ -0.05
LINC01856-201ENST00000450840 TOP2AP11388 1531 aaKnown RBP14.76□□□□□ -0.05
LINC01856-201ENST00000450840 BAZ1BQ9UIG0 1483 aaKnown RBP14.76□□□□□ -0.05
LINC01856-201ENST00000450840 NCAPD3P42695 1498 aa14.69□□□□□ -0.06
LINC01856-201ENST00000450840 CCDC88BA6NC98 1476 aa14.67□□□□□ -0.06
LINC01856-201ENST00000450840 HMGXB3Q12766 1538 aa14.64□□□□□ -0.07
LINC01856-201ENST00000450840 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
LINC01856-201ENST00000450840 NESP48681 1621 aa14.44□□□□□ -0.1
LINC01856-201ENST00000450840 PPP6R1Q9UPN7 881 aa14.41□□□□□ -0.1
LINC01856-201ENST00000450840 ABCC8Q09428 1581 aa14.41□□□□□ -0.1
LINC01856-201ENST00000450840 CFTRP13569 1480 aa14.35□□□□□ -0.11
LINC01856-201ENST00000450840 CADPSQ9ULU8 1353 aa14.35□□□□□ -0.11
LINC01856-201ENST00000450840 SLC4A1APQ9BWU0 796 aaKnown RBP14.33□□□□□ -0.11
LINC01856-201ENST00000450840 SLC24A1O60721 1099 aa14.31□□□□□ -0.12
LINC01856-201ENST00000450840 TRIM41Q8WV44 630 aa14.29□□□□□ -0.12
LINC01856-201ENST00000450840 FANCD2Q9BXW9 1451 aa14.22□□□□□ -0.13
LINC01856-201ENST00000450840 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
LINC01856-201ENST00000450840 PRDM2Q13029 1718 aa14.21□□□□□ -0.13
LINC01856-201ENST00000450840 WRNQ14191 1432 aaPredicted RBP eCLIP14.21□□□□□ -0.13
LINC01856-201ENST00000450840 LAMC3Q9Y6N6 1575 aa14.21□□□□□ -0.14
LINC01856-201ENST00000450840 FAM9AQ8IZU1 332 aaPredicted RBP14.19□□□□□ -0.14
LINC01856-201ENST00000450840 KIF21AQ7Z4S6 1674 aa14.18□□□□□ -0.14
LINC01856-201ENST00000450840 CUX1P39880 1505 aa14.16□□□□□ -0.14
LINC01856-201ENST00000450840 CEP164Q9UPV0 1460 aa14.13□□□□□ -0.15
LINC01856-201ENST00000450840 PDS5BQ9NTI5 1447 aa14.12□□□□□ -0.15
LINC01856-201ENST00000450840 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.15
LINC01856-201ENST00000450840 TOP2BQ02880 1626 aa14.08□□□□□ -0.16
LINC01856-201ENST00000450840 SOGA1O94964 1423 aa14.08□□□□□ -0.16
LINC01856-201ENST00000450840 RUSC2Q8N2Y8 1516 aa14.08□□□□□ -0.16
LINC01856-201ENST00000450840 ERCC6Q03468 1493 aa14.07□□□□□ -0.16
LINC01856-201ENST00000450840 BIVM-ERCC5R4GMW8 1640 aa14.05□□□□□ -0.16
LINC01856-201ENST00000450840 TOPBP1Q92547 1522 aa14.04□□□□□ -0.16
LINC01856-201ENST00000450840 FGD5Q6ZNL6 1462 aa14.03□□□□□ -0.16
LINC01856-201ENST00000450840 LOC105371045A0A1W2PR82 267 aa14.03□□□□□ -0.16
LINC01856-201ENST00000450840 DNMBPQ6XZF7 1577 aa14.01□□□□□ -0.17
LINC01856-201ENST00000450840 RAD54L2Q9Y4B4 1467 aa14.01□□□□□ -0.17
LINC01856-201ENST00000450840 POLA1P09884 1462 aaPredicted RBP13.99□□□□□ -0.17
LINC01856-201ENST00000450840 RTN4Q9NQC3 1192 aaKnown RBP13.98□□□□□ -0.17
LINC01856-201ENST00000450840 MRC2Q9UBG0 1479 aa13.98□□□□□ -0.17
LINC01856-201ENST00000450840 FOXD1Q16676 465 aa13.97□□□□□ -0.17
LINC01856-201ENST00000450840 THOC2Q8NI27 1593 aaKnown RBP13.95□□□□□ -0.18
LINC01856-201ENST00000450840 PPP4R3CPQ6ZMV5 832 aa13.93□□□□□ -0.18
LINC01856-201ENST00000450840 CUX2O14529 1486 aa13.91□□□□□ -0.18
LINC01856-201ENST00000450840 WDR62O43379 1518 aa13.9□□□□□ -0.18
LINC01856-201ENST00000450840 TDRD9Q8NDG6 1382 aaKnown RBP13.88□□□□□ -0.19
LINC01856-201ENST00000450840 ZBTB22O15209 634 aa13.88□□□□□ -0.19
LINC01856-201ENST00000450840 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
LINC01856-201ENST00000450840 TARBP1Q13395 1621 aaKnown RBP13.84□□□□□ -0.19
LINC01856-201ENST00000450840 KIF27Q86VH2 1401 aa13.83□□□□□ -0.2
LINC01856-201ENST00000450840 ABCA10Q8WWZ4 1543 aa13.82□□□□□ -0.2
LINC01856-201ENST00000450840 WDR97A6NE52 1622 aa13.82□□□□□ -0.2
LINC01856-201ENST00000450840 AQRO60306 1485 aaKnown RBP eCLIP13.82□□□□□ -0.2
LINC01856-201ENST00000450840 IGF1RP08069 1367 aa13.77□□□□□ -0.2
LINC01856-201ENST00000450840 RAPGEF2Q9Y4G8 1499 aa13.77□□□□□ -0.2
LINC01856-201ENST00000450840 EEA1Q15075 1411 aa13.77□□□□□ -0.2
LINC01856-201ENST00000450840 GAPVD1Q14C86 1478 aa13.75□□□□□ -0.21
LINC01856-201ENST00000450840 RANGAP1P46060 587 aaPredicted RBP13.75□□□□□ -0.21
LINC01856-201ENST00000450840 ABCA5Q8WWZ7 1642 aa13.75□□□□□ -0.21
LINC01856-201ENST00000450840 IFT140Q96RY7 1462 aa13.75□□□□□ -0.21
LINC01856-201ENST00000450840 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
LINC01856-201ENST00000450840 UBTFP17480 764 aaKnown RBP13.73□□□□□ -0.21
LINC01856-201ENST00000450840 AMER1Q5JTC6 1135 aaPredicted RBP13.72□□□□□ -0.21
LINC01856-201ENST00000450840 EIF4G3O43432 1585 aaKnown RBP13.72□□□□□ -0.21
LINC01856-201ENST00000450840 PRXQ9BXM0 1461 aa13.71□□□□□ -0.22
LINC01856-201ENST00000450840 NCBP3Q53F19 620 aaKnown RBP13.71□□□□□ -0.22
LINC01856-201ENST00000450840 CARMIL1Q5VZK9 1371 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms