Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 DCAF11-229ENST00000560457 578 ntTSL 39.74□□□□□ -0.851e-15■■□□□ 13.2
PRPF8Q6P2Q9 DCAF11-214ENST00000558706 641 ntTSL 49.32□□□□□ -0.921e-15■■□□□ 13.2
PRPF8Q6P2Q9 DCAF11-208ENST00000557888 552 ntTSL 47.76□□□□□ -1.171e-15■■□□□ 13.2
PRPF8Q6P2Q9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.86■■□□□ 1.095e-8■■□□□ 13.2
PRPF8Q6P2Q9 STARD10-210ENST00000537947 1100 ntTSL 321.04■□□□□ 0.965e-8■■□□□ 13.2
PRPF8Q6P2Q9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.135e-8■■□□□ 13.2
PRPF8Q6P2Q9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.025e-8■■□□□ 13.2
PRPF8Q6P2Q9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.34□□□□□ -0.115e-8■■□□□ 13.2
PRPF8Q6P2Q9 CCAR2-204ENST00000520536 2173 ntTSL 213.77□□□□□ -0.22e-6■■□□□ 13.2
PRPF8Q6P2Q9 LDHD-203ENST00000568164 740 ntTSL 318.05■□□□□ 0.482e-12■■□□□ 13.2
PRPF8Q6P2Q9 AMBRA1-205ENST00000526606 522 ntTSL 417.71■□□□□ 0.432e-12■■□□□ 13.2
PRPF8Q6P2Q9 PPP1R35-203ENST00000476185 474 ntTSL 217.41■□□□□ 0.381e-21■■□□□ 13.2
PRPF8Q6P2Q9 TCIRG1-204ENST00000525516 708 ntTSL 216.69■□□□□ 0.262e-12■■□□□ 13.2
PRPF8Q6P2Q9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.012e-12■■□□□ 13.2
PRPF8Q6P2Q9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.182e-12■■□□□ 13.2
PRPF8Q6P2Q9 LDHD-204ENST00000569876 701 ntTSL 513.24□□□□□ -0.292e-12■■□□□ 13.2
PRPF8Q6P2Q9 FAM118A-207ENST00000459849 695 ntTSL 311.03□□□□□ -0.642e-12■■□□□ 13.2
PRPF8Q6P2Q9 FAM118A-210ENST00000476754 675 ntTSL 38.84□□□□□ -0.992e-12■■□□□ 13.2
PRPF8Q6P2Q9 FAM118A-209ENST00000476478 354 ntTSL 38.77□□□□□ -1.012e-12■■□□□ 13.2
PRPF8Q6P2Q9 MAPK12-207ENST00000492218 498 ntTSL 420.7■□□□□ 0.93e-10■■□□□ 13.2
PRPF8Q6P2Q9 ITIH3-201ENST00000416872 2220 ntTSL 2 BASIC8.45□□□□□ -1.068e-9■■□□□ 13.2
PRPF8Q6P2Q9 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.278e-9■■□□□ 13.2
PRPF8Q6P2Q9 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC6.4□□□□□ -1.388e-9■■□□□ 13.2
PRPF8Q6P2Q9 AEN-202ENST00000557787 1242 ntTSL 1 (best)13.72□□□□□ -0.213e-9■■□□□ 13.1
PRPF8Q6P2Q9 EXOSC10-211ENST00000498576 486 ntTSL 48.12□□□□□ -1.112e-6■■□□□ 13.1
PRPF8Q6P2Q9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.71■□□□□ 0.433e-7■■□□□ 13.1
PRPF8Q6P2Q9 ANKRD10-206ENST00000465753 997 ntTSL 1 (best)16.68■□□□□ 0.263e-7■■□□□ 13.1
PRPF8Q6P2Q9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.263e-7■■□□□ 13.1
PRPF8Q6P2Q9 P3H4-203ENST00000465097 571 ntTSL 512.53□□□□□ -0.48e-9■■□□□ 13.1
PRPF8Q6P2Q9 P3H4-205ENST00000484247 1866 ntTSL 211.91□□□□□ -0.58e-9■■□□□ 13.1
PRPF8Q6P2Q9 PGAM1-202ENST00000467867 1187 ntTSL 210.06□□□□□ -0.84e-8■■□□□ 13.1
PRPF8Q6P2Q9 SPOPL-203ENST00000430968 558 ntTSL 520.7■□□□□ 0.96e-16■■□□□ 13.1
PRPF8Q6P2Q9 OAZ1-205ENST00000589361 679 ntTSL 1 (best)13.46□□□□□ -0.255e-9■■□□□ 13.1
PRPF8Q6P2Q9 RPS18-236ENST00000490191 996 ntTSL 214.16□□□□□ -0.144e-12■■□□□ 13.1
PRPF8Q6P2Q9 RPS18-230ENST00000439602 613 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.84e-12■■□□□ 13.1
PRPF8Q6P2Q9 RPS18-233ENST00000474973 589 ntTSL 2 BASIC10.05□□□□□ -0.84e-12■■□□□ 13.1
PRPF8Q6P2Q9 RPS18-234ENST00000476222 685 ntTSL 1 (best)10.05□□□□□ -0.84e-12■■□□□ 13.1
PRPF8Q6P2Q9 RPS18-235ENST00000479802 413 ntTSL 210.05□□□□□ -0.83e-8■■□□□ 13.1
PRPF8Q6P2Q9 RPS18-231ENST00000472218 1109 ntTSL 28.68□□□□□ -1.023e-8■■□□□ 13.1
PRPF8Q6P2Q9 RPS18-232ENST00000474626 639 ntTSL 38.19□□□□□ -1.14e-12■■□□□ 13.1
PRPF8Q6P2Q9 RPS18-237ENST00000496813 642 ntTSL 28.19□□□□□ -1.14e-12■■□□□ 13.1
PRPF8Q6P2Q9 DECR2-203ENST00000429116 721 ntTSL 314.02□□□□□ -0.162e-8■■□□□ 13.1
PRPF8Q6P2Q9 LMBR1-212ENST00000448926 3629 ntTSL 23.47□□□□□ -1.851e-10■■□□□ 13.1
PRPF8Q6P2Q9 SLC5A6-216ENST00000481751 615 ntTSL 211.24□□□□□ -0.614e-9■■□□□ 13.1
PRPF8Q6P2Q9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.053e-7■■□□□ 13.1
PRPF8Q6P2Q9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.13e-7■■□□□ 13.1
PRPF8Q6P2Q9 GUK1-237ENST00000495999 555 ntTSL 313.47□□□□□ -0.253e-7■■□□□ 13.1
PRPF8Q6P2Q9 GUK1-211ENST00000412265 1012 ntTSL 511.75□□□□□ -0.533e-7■■□□□ 13.1
PRPF8Q6P2Q9 GUK1-219ENST00000470040 2548 ntTSL 211.34□□□□□ -0.593e-7■■□□□ 13.1
PRPF8Q6P2Q9 GUK1-232ENST00000486668 738 ntTSL 311.2□□□□□ -0.623e-7■■□□□ 13.1
PRPF8Q6P2Q9 ATP13A3-202ENST00000429136 3729 ntTSL 1 (best)4.15□□□□□ -1.751e-7■■□□□ 13.1
PRPF8Q6P2Q9 ABCC1-206ENST00000574761 996 ntTSL 210.59□□□□□ -0.714e-19■■□□□ 13.1
PRPF8Q6P2Q9 DCUN1D4-212ENST00000507659 551 ntTSL 48.51□□□□□ -1.058e-8■■□□□ 13.1
PRPF8Q6P2Q9 DCUN1D4-210ENST00000505634 843 ntTSL 37.93□□□□□ -1.148e-8■■□□□ 13.1
PRPF8Q6P2Q9 DCUN1D4-218ENST00000510587 475 ntTSL 44.1□□□□□ -1.758e-8■■□□□ 13.1
PRPF8Q6P2Q9 NAP1L4-205ENST00000455338 352 ntTSL 52.31□□□□□ -2.041e-10■■□□□ 13.1
PRPF8Q6P2Q9 AGXT-204ENST00000476698 507 ntTSL 512.17□□□□□ -0.462e-12■■□□□ 13.1
PRPF8Q6P2Q9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.25□□□□□ -0.457e-9■■□□□ 13.1
PRPF8Q6P2Q9 TIA1-214ENST00000482876 562 ntTSL 53.08□□□□□ -1.921e-9■■□□□ 13.1
PRPF8Q6P2Q9 TAF4-202ENST00000436129 2440 ntTSL 211.02□□□□□ -0.652e-7■■□□□ 13.1
PRPF8Q6P2Q9 DEAF1-211ENST00000529727 248 ntTSL 36.27□□□□□ -1.414e-12■■□□□ 13.1
PRPF8Q6P2Q9 AIFM1-207ENST00000529877 723 ntTSL 314.38□□□□□ -0.117e-10■■□□□ 13.1
PRPF8Q6P2Q9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.37e-10■■□□□ 13.1
PRPF8Q6P2Q9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.327e-10■■□□□ 13.1
PRPF8Q6P2Q9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.79□□□□□ -0.527e-10■■□□□ 13.1
PRPF8Q6P2Q9 AIFM1-204ENST00000416073 2248 ntTSL 1 (best)11.69□□□□□ -0.547e-10■■□□□ 13.1
PRPF8Q6P2Q9 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC11.22□□□□□ -0.617e-10■■□□□ 13.1
PRPF8Q6P2Q9 AIFM1-206ENST00000527892 2105 ntTSL 28.17□□□□□ -1.17e-10■■□□□ 13.1
PRPF8Q6P2Q9 CFB-273ENST00000460718 768 ntTSL 510.01□□□□□ -0.816e-16■■□□□ 13.1
PRPF8Q6P2Q9 ARHGEF17-202ENST00000536170 793 ntTSL 216.25■□□□□ 0.192e-8■■□□□ 13.1
PRPF8Q6P2Q9 ATP13A1-210ENST00000491221 937 ntTSL 212.05□□□□□ -0.482e-7■■□□□ 13.1
PRPF8Q6P2Q9 APOC4-APOC2-201ENST00000585685 1829 ntTSL 512.64□□□□□ -0.393e-12■■□□□ 13.1
PRPF8Q6P2Q9 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.753e-12■■□□□ 13.1
PRPF8Q6P2Q9 APOC4-APOC2-202ENST00000589057 680 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.873e-12■■□□□ 13.1
PRPF8Q6P2Q9 APOC2-202ENST00000585786 880 ntTSL 2 BASIC7.12□□□□□ -1.273e-12■■□□□ 13.1
PRPF8Q6P2Q9 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.12□□□□□ -1.273e-12■■□□□ 13.1
PRPF8Q6P2Q9 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.62□□□□□ -1.513e-12■■□□□ 13.1
PRPF8Q6P2Q9 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.923e-12■■□□□ 13.1
PRPF8Q6P2Q9 SLC1A5-204ENST00000593713 774 ntTSL 39.39□□□□□ -0.911e-10■■□□□ 13.1
PRPF8Q6P2Q9 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)12.83□□□□□ -0.364e-41■■□□□ 13.1
PRPF8Q6P2Q9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.391e-13■■□□□ 13.1
PRPF8Q6P2Q9 TRIM8-202ENST00000462202 891 ntTSL 518.22■□□□□ 0.516e-7■■□□□ 13.1
PRPF8Q6P2Q9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.166e-7■■□□□ 13.1
PRPF8Q6P2Q9 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC9.29□□□□□ -0.929e-7■■□□□ 13.1
PRPF8Q6P2Q9 GBA2-205ENST00000485259 717 ntTSL 312.89□□□□□ -0.357e-8■■□□□ 13.1
PRPF8Q6P2Q9 RPS5-207ENST00000599232 1747 nt13.64□□□□□ -0.231e-8■■□□□ 13.1
PRPF8Q6P2Q9 SAT2-212ENST00000576579 535 ntTSL 39.73□□□□□ -0.852e-11■■□□□ 13.1
PRPF8Q6P2Q9 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.667e-7■■□□□ 13.1
PRPF8Q6P2Q9 NDUFA5-206ENST00000470123 459 ntTSL 210.49□□□□□ -0.732e-9■■□□□ 13.1
PRPF8Q6P2Q9 NDUFA5-205ENST00000467117 687 ntTSL 210.35□□□□□ -0.752e-9■■□□□ 13.1
PRPF8Q6P2Q9 NDUFA5-209ENST00000491033 662 ntTSL 210.35□□□□□ -0.752e-9■■□□□ 13.1
PRPF8Q6P2Q9 NDUFA5-211ENST00000611607 1504 ntTSL 2 BASIC9.75□□□□□ -0.852e-9■■□□□ 13.1
PRPF8Q6P2Q9 NDUFA5-201ENST00000355749 1901 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.872e-9■■□□□ 13.1
PRPF8Q6P2Q9 NDUFA5-212ENST00000618945 1432 ntTSL 2 BASIC9.55□□□□□ -0.882e-9■■□□□ 13.1
PRPF8Q6P2Q9 NDUFA5-204ENST00000466896 778 ntTSL 38.62□□□□□ -1.032e-9■■□□□ 13.1
PRPF8Q6P2Q9 NDUFA5-210ENST00000492549 571 ntTSL 25.67□□□□□ -1.52e-9■■□□□ 13.1
PRPF8Q6P2Q9 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.69□□□□□ -1.662e-9■■□□□ 13.1
PRPF8Q6P2Q9 NDUFA5-202ENST00000378795 1360 ntTSL 22.63□□□□□ -1.992e-9■■□□□ 13.1
PRPF8Q6P2Q9 AC005394.1-201ENST00000589999 1269 ntTSL 1 (best) BASIC8.18□□□□□ -1.14e-12■■□□□ 13.1
PRPF8Q6P2Q9 FAM193B-212ENST00000510163 2237 ntTSL 1 (best)11.76□□□□□ -0.531e-7■■□□□ 13.1
Retrieved 100 of 73,762 protein–RNA pairs in 1597.8 ms