Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 EEF1A1P2-201ENST00000553854 1447 ntBASIC7.54□□□□□ -1.2
P04436 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
P04436 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
P04436 RNA5SP263-201ENST00000363376 128 ntBASIC7.54□□□□□ -1.2
P04436 SMARCA2-205ENST00000382183 1178 ntTSL 5 BASIC7.54□□□□□ -1.2
P04436 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
P04436 RNA5SP256-201ENST00000390978 113 ntBASIC7.54□□□□□ -1.2
P04436 RPSAP42-201ENST00000403415 878 ntBASIC7.54□□□□□ -1.2
P04436 RN7SKP139-201ENST00000410411 293 ntBASIC7.54□□□□□ -1.2
P04436 UPF3AP1-201ENST00000413731 1126 ntBASIC7.54□□□□□ -1.2
P04436 UBTFL7-201ENST00000418789 1191 ntBASIC7.54□□□□□ -1.2
P04436 ACTP1-201ENST00000440793 383 ntBASIC7.54□□□□□ -1.2
P04436 GAS5-219ENST00000449289 542 ntTSL 3 BASIC7.54□□□□□ -1.2
P04436 DBIL5P-202ENST00000453414 250 ntBASIC7.54□□□□□ -1.2
P04436 RN7SL621P-201ENST00000472565 299 ntBASIC7.54□□□□□ -1.2
P04436 RPS3P7-201ENST00000488662 726 ntBASIC7.54□□□□□ -1.2
P04436 RPL7AP2-201ENST00000496515 740 ntBASIC7.54□□□□□ -1.2
P04436 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC7.54□□□□□ -1.2
P04436 GAPDHP31-201ENST00000509325 1014 ntBASIC7.54□□□□□ -1.2
P04436 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC7.54□□□□□ -1.2
P04436 VPS29-203ENST00000546588 1059 ntTSL 3 BASIC7.54□□□□□ -1.2
P04436 SLC25A3P2-201ENST00000547720 880 ntBASIC7.54□□□□□ -1.2
P04436 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC7.54□□□□□ -1.2
P04436 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC7.54□□□□□ -1.2
P04436 AC026401.2-201ENST00000576454 503 ntTSL 3 BASIC7.54□□□□□ -1.2
P04436 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC7.54□□□□□ -1.2
P04436 APOC2-202ENST00000585786 880 ntTSL 2 BASIC7.54□□□□□ -1.2
P04436 AC087645.1-201ENST00000588528 291 ntBASIC7.54□□□□□ -1.2
P04436 AC100843.2-201ENST00000589084 324 ntTSL 5 BASIC7.54□□□□□ -1.2
P04436 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.54□□□□□ -1.2
P04436 AC007346.1-202ENST00000602826 684 ntBASIC7.54□□□□□ -1.2
P04436 RBM22P6-201ENST00000611682 867 ntBASIC7.54□□□□□ -1.2
P04436 RN7SL113P-201ENST00000619959 299 ntBASIC7.54□□□□□ -1.2
P04436 AC024580.1-201ENST00000623020 674 ntBASIC7.54□□□□□ -1.2
P04436 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC7.54□□□□□ -1.2
P04436 HCCAT5-202ENST00000642127 1029 ntBASIC7.54□□□□□ -1.2
P04436 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC7.54□□□□□ -1.2
P04436 EEF1A1P11-201ENST00000415278 1389 ntBASIC7.54□□□□□ -1.2
P04436 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 AF228730.7-203ENST00000641436 1804 ntBASIC7.54□□□□□ -1.2
P04436 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC7.54□□□□□ -1.2
P04436 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 SERPINB2-201ENST00000299502 1913 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
P04436 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC7.54□□□□□ -1.2
P04436 Z97200.1-201ENST00000606154 2045 ntBASIC7.54□□□□□ -1.2
P04436 AC092718.7-201ENST00000623577 1776 ntBASIC7.54□□□□□ -1.2
P04436 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
P04436 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
P04436 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
P04436 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
P04436 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
P04436 SPATA7-201ENST00000045347 1410 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
P04436 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC7.53□□□□□ -1.2
P04436 AL049833.3-201ENST00000623920 3738 ntBASIC7.53□□□□□ -1.2
P04436 AC007638.2-201ENST00000574716 1740 ntTSL 2 BASIC7.53□□□□□ -1.2
P04436 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
P04436 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
P04436 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
P04436 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
P04436 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
P04436 TARS2P1-201ENST00000506124 2041 ntBASIC7.53□□□□□ -1.2
P04436 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
P04436 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
P04436 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
P04436 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
P04436 RN7SKP133-201ENST00000364845 340 ntBASIC7.53□□□□□ -1.2
P04436 SNORA35-201ENST00000386104 128 ntBASIC7.53□□□□□ -1.2
P04436 RN7SKP127-201ENST00000410443 354 ntBASIC7.53□□□□□ -1.2
P04436 AC003080.1-201ENST00000413552 767 ntBASIC7.53□□□□□ -1.2
P04436 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC7.53□□□□□ -1.2
P04436 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC7.53□□□□□ -1.2
P04436 AC092066.1-201ENST00000425131 317 ntBASIC7.53□□□□□ -1.2
P04436 RANP5-201ENST00000427731 655 ntBASIC7.53□□□□□ -1.2
P04436 AC108448.2-201ENST00000431546 730 ntBASIC7.53□□□□□ -1.2
P04436 PSPC1P1-201ENST00000442352 665 ntBASIC7.53□□□□□ -1.2
P04436 OR7H1P-201ENST00000448965 922 ntBASIC7.53□□□□□ -1.2
P04436 RPSAP54-201ENST00000454001 886 ntBASIC7.53□□□□□ -1.2
P04436 AC100843.1-201ENST00000475372 550 ntBASIC7.53□□□□□ -1.2
P04436 RPL4P1-201ENST00000496596 1278 ntBASIC7.53□□□□□ -1.2
P04436 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC7.53□□□□□ -1.2
P04436 FAXDC2-206ENST00000518651 536 ntTSL 4 BASIC7.53□□□□□ -1.2
P04436 AC073896.2-201ENST00000549565 399 ntTSL 2 BASIC7.53□□□□□ -1.2
P04436 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC7.53□□□□□ -1.2
P04436 AC005230.1-201ENST00000555418 285 ntBASIC7.53□□□□□ -1.2
P04436 AL357093.1-201ENST00000556926 458 ntTSL 2 BASIC7.53□□□□□ -1.2
P04436 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
P04436 AC010385.2-201ENST00000603743 490 ntBASIC7.53□□□□□ -1.2
P04436 AL133464.1-204ENST00000634280 1094 ntTSL 5 BASIC7.53□□□□□ -1.2
P04436 INPP5B-205ENST00000373027 3905 ntTSL 2 BASIC7.53□□□□□ -1.2
P04436 CDY1B-202ENST00000382407 2227 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
P04436 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC7.53□□□□□ -1.2
P04436 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
P04436 UBE2U-206ENST00000611228 1550 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms