RNA–Protein interactions for RNA: ENST00000226460.4

SMR3A-201, Transcript of submaxillary gland androgen regulated protein 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMR3A, Length 665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMR3A-201ENST00000226460 AEBP2Q6ZN18 517 aaPredicted RBP25.16■■□□□ 1.62
SMR3A-201ENST00000226460 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
SMR3A-201ENST00000226460 SENP3Q9H4L4 574 aaPredicted RBP21.59■■□□□ 1.05
SMR3A-201ENST00000226460 PHF23Q9BUL5 403 aaPredicted RBP21.22■□□□□ 0.99
SMR3A-201ENST00000226460 NISCHQ9Y2I1 1504 aa21.18■□□□□ 0.98
SMR3A-201ENST00000226460 FOXD1Q16676 465 aa20.09■□□□□ 0.81
SMR3A-201ENST00000226460 ABCC9O60706 1549 aa19.51■□□□□ 0.71
SMR3A-201ENST00000226460 MSH5O43196 834 aa18.99■□□□□ 0.63
SMR3A-201ENST00000226460 POTEDQ86YR6 584 aa18.96■□□□□ 0.63
SMR3A-201ENST00000226460 CCDC180Q9P1Z9 1646 aa18.95■□□□□ 0.62
SMR3A-201ENST00000226460 PLPPR3Q6T4P5 718 aa18.8■□□□□ 0.6
SMR3A-201ENST00000226460 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
SMR3A-201ENST00000226460 PIAS4Q8N2W9 510 aaPredicted RBP18.72■□□□□ 0.59
SMR3A-201ENST00000226460 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
SMR3A-201ENST00000226460 ADRA2BP18089 450 aa18.46■□□□□ 0.55
SMR3A-201ENST00000226460 RB1CC1Q8TDY2 1594 aa18.25■□□□□ 0.51
SMR3A-201ENST00000226460 PABPN1Q86U42 306 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMR3A-201ENST00000226460 DCAF8L2P0C7V8 631 aa18.14■□□□□ 0.49
SMR3A-201ENST00000226460 NACADO15069 1562 aa18.05■□□□□ 0.48
SMR3A-201ENST00000226460 UNC13AQ9UPW8 1703 aa17.9■□□□□ 0.46
SMR3A-201ENST00000226460 BICRAQ9NZM4 1560 aa17.9■□□□□ 0.46
SMR3A-201ENST00000226460 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
SMR3A-201ENST00000226460 CECR2Q9BXF3 1484 aa17.55■□□□□ 0.4
SMR3A-201ENST00000226460 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
SMR3A-201ENST00000226460 ZCCHC6Q5VYS8 1495 aaKnown RBP17.45■□□□□ 0.38
SMR3A-201ENST00000226460 SCRIBQ14160 1630 aa17.41■□□□□ 0.38
SMR3A-201ENST00000226460 EIF4G1Q04637 1599 aaKnown RBP17.4■□□□□ 0.38
SMR3A-201ENST00000226460 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
SMR3A-201ENST00000226460 SHROOM4Q9ULL8 1493 aa17.35■□□□□ 0.37
SMR3A-201ENST00000226460 DNAJC5Q9H3Z4 198 aa17.31■□□□□ 0.36
SMR3A-201ENST00000226460 DMRT2Q9Y5R5 561 aa17.06■□□□□ 0.32
SMR3A-201ENST00000226460 MAPK8IP2Q13387 824 aaPredicted RBP17.02■□□□□ 0.32
SMR3A-201ENST00000226460 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
SMR3A-201ENST00000226460 CUX2O14529 1486 aa16.78■□□□□ 0.28
SMR3A-201ENST00000226460 NCAPD3P42695 1498 aa16.77■□□□□ 0.28
SMR3A-201ENST00000226460 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
SMR3A-201ENST00000226460 NESP48681 1621 aa16.72■□□□□ 0.27
SMR3A-201ENST00000226460 ATAD2BQ9ULI0 1458 aa16.71■□□□□ 0.27
SMR3A-201ENST00000226460 SMARCA4P51532 1647 aa16.53■□□□□ 0.24
SMR3A-201ENST00000226460 HMGXB3Q12766 1538 aa16.51■□□□□ 0.23
SMR3A-201ENST00000226460 SMARCA2P51531 1590 aa16.5■□□□□ 0.23
SMR3A-201ENST00000226460 THOC2Q8NI27 1593 aaKnown RBP16.46■□□□□ 0.23
SMR3A-201ENST00000226460 BAZ1BQ9UIG0 1483 aaKnown RBP16.44■□□□□ 0.22
SMR3A-201ENST00000226460 TRIM41Q8WV44 630 aa16.44■□□□□ 0.22
SMR3A-201ENST00000226460 CACNB1Q02641 598 aaPredicted RBP16.42■□□□□ 0.22
SMR3A-201ENST00000226460 PPP4R3CPQ6ZMV5 832 aa16.41■□□□□ 0.22
SMR3A-201ENST00000226460 MROH2BQ7Z745 1585 aa16.39■□□□□ 0.21
SMR3A-201ENST00000226460 BAZ1AQ9NRL2 1556 aaPredicted RBP16.36■□□□□ 0.21
SMR3A-201ENST00000226460 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
SMR3A-201ENST00000226460 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
SMR3A-201ENST00000226460 LAMC3Q9Y6N6 1575 aa16.34■□□□□ 0.21
SMR3A-201ENST00000226460 HOXD11P31277 338 aaPredicted RBP16.33■□□□□ 0.2
SMR3A-201ENST00000226460 DCAF8L1A6NGE4 600 aa16.32■□□□□ 0.2
SMR3A-201ENST00000226460 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
SMR3A-201ENST00000226460 CADPSQ9ULU8 1353 aa16.26■□□□□ 0.19
SMR3A-201ENST00000226460 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
SMR3A-201ENST00000226460 MRC2Q9UBG0 1479 aa16.18■□□□□ 0.18
SMR3A-201ENST00000226460 WDR62O43379 1518 aa16.14■□□□□ 0.18
SMR3A-201ENST00000226460 RNF39Q9H2S5 420 aa16.14■□□□□ 0.17
SMR3A-201ENST00000226460 WIZO95785 1651 aa16.14■□□□□ 0.17
SMR3A-201ENST00000226460 RNF216Q9NWF9 866 aaPredicted RBP16.13■□□□□ 0.17
SMR3A-201ENST00000226460 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
SMR3A-201ENST00000226460 FANCD2Q9BXW9 1451 aa16.06■□□□□ 0.16
SMR3A-201ENST00000226460 CEP164Q9UPV0 1460 aa16.04■□□□□ 0.16
SMR3A-201ENST00000226460 URB2Q14146 1524 aaKnown RBP16■□□□□ 0.15
SMR3A-201ENST00000226460 CFTRP13569 1480 aa16■□□□□ 0.15
SMR3A-201ENST00000226460 RSF1Q96T23 1441 aaPredicted RBP15.94■□□□□ 0.14
SMR3A-201ENST00000226460 C1QBPQ07021 282 aaKnown RBP15.93■□□□□ 0.14
SMR3A-201ENST00000226460 ZNF608Q9ULD9 1512 aaPredicted RBP15.9■□□□□ 0.14
SMR3A-201ENST00000226460 RIMBP3CA6NJZ7 1639 aa15.86■□□□□ 0.13
SMR3A-201ENST00000226460 RIMBP3BA6NNM3 1639 aa15.86■□□□□ 0.13
SMR3A-201ENST00000226460 RIMBP3Q9UFD9 1639 aa15.86■□□□□ 0.13
SMR3A-201ENST00000226460 TOP2AP11388 1531 aaKnown RBP15.82■□□□□ 0.12
SMR3A-201ENST00000226460 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
SMR3A-201ENST00000226460 ARHGEF11O15085 1522 aa15.78■□□□□ 0.12
SMR3A-201ENST00000226460 CCDC88BA6NC98 1476 aa15.77■□□□□ 0.11
SMR3A-201ENST00000226460 IFT140Q96RY7 1462 aa15.74■□□□□ 0.11
SMR3A-201ENST00000226460 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
SMR3A-201ENST00000226460 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
SMR3A-201ENST00000226460 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.11
SMR3A-201ENST00000226460 ARAP1Q96P48 1450 aa15.66■□□□□ 0.1
SMR3A-201ENST00000226460 TRHP20396 242 aaPredicted RBP15.66■□□□□ 0.1
SMR3A-201ENST00000226460 FBLN2P98095 1184 aa15.65■□□□□ 0.1
SMR3A-201ENST00000226460 EIF4G3O43432 1585 aaKnown RBP15.64■□□□□ 0.09
SMR3A-201ENST00000226460 PRDM2Q13029 1718 aa15.61■□□□□ 0.09
SMR3A-201ENST00000226460 TARBP1Q13395 1621 aaKnown RBP15.61■□□□□ 0.09
SMR3A-201ENST00000226460 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
SMR3A-201ENST00000226460 CHD1O14646 1710 aa15.58■□□□□ 0.08
SMR3A-201ENST00000226460 TDRD9Q8NDG6 1382 aaKnown RBP15.58■□□□□ 0.08
SMR3A-201ENST00000226460 DNMBPQ6XZF7 1577 aa15.57■□□□□ 0.08
SMR3A-201ENST00000226460 POLA1P09884 1462 aaPredicted RBP15.55■□□□□ 0.08
SMR3A-201ENST00000226460 ABCC8Q09428 1581 aa15.53■□□□□ 0.08
SMR3A-201ENST00000226460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMR3A-201ENST00000226460 SOGA1O94964 1423 aa15.5■□□□□ 0.07
SMR3A-201ENST00000226460 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.06
SMR3A-201ENST00000226460 NPM3O75607 178 aaKnown RBP15.45■□□□□ 0.06
SMR3A-201ENST00000226460 CLASP1Q7Z460 1538 aa15.43■□□□□ 0.06
SMR3A-201ENST00000226460 CHMP7Q8WUX9 453 aaPredicted RBP15.43■□□□□ 0.06
SMR3A-201ENST00000226460 FGD5Q6ZNL6 1462 aa15.41■□□□□ 0.06
SMR3A-201ENST00000226460 CUX1P39880 1505 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms