RNA–Protein interactions for RNA: ENST00000338040.5

FBXO40-201, Transcript of F-box protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO40, Length 5,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40-201ENST00000338040 PELP1Q8IZL8 1130 aaKnown RBP13.29□□□□□ -0.28
FBXO40-201ENST00000338040 DCAF8L2P0C7V8 631 aa13.04□□□□□ -0.32
FBXO40-201ENST00000338040 MYT1Q01538 1121 aa13.02□□□□□ -0.32
FBXO40-201ENST00000338040 NISCHQ9Y2I1 1504 aa12.96□□□□□ -0.33
FBXO40-201ENST00000338040 SUPT5HO00267 1087 aaKnown RBP12.82□□□□□ -0.36
FBXO40-201ENST00000338040 CENPBP07199 599 aaPredicted RBP12.68□□□□□ -0.38
FBXO40-201ENST00000338040 ZEB1P37275 1124 aaPredicted RBP12.67□□□□□ -0.38
FBXO40-201ENST00000338040 CCER1Q8TC90 406 aaPredicted RBP12.64□□□□□ -0.39
FBXO40-201ENST00000338040 ERICH6Q7L0X2 663 aa12.58□□□□□ -0.4
FBXO40-201ENST00000338040 APLP2Q06481 763 aa12.49□□□□□ -0.41
FBXO40-201ENST00000338040 SHROOM4Q9ULL8 1493 aa12.42□□□□□ -0.42
FBXO40-201ENST00000338040 PCGF6Q9BYE7 350 aa12.41□□□□□ -0.42
FBXO40-201ENST00000338040 NEFLP07196 543 aa12.27□□□□□ -0.45
FBXO40-201ENST00000338040 EHMT2Q96KQ7 1210 aa12.21□□□□□ -0.45
FBXO40-201ENST00000338040 FAM9AQ8IZU1 332 aaPredicted RBP12.14□□□□□ -0.47
FBXO40-201ENST00000338040 HRCP23327 699 aa12.1□□□□□ -0.47
FBXO40-201ENST00000338040 YTHDC1Q96MU7 727 aaKnown RBP12.09□□□□□ -0.47
FBXO40-201ENST00000338040 TRIM26Q12899 539 aaPredicted RBP12.04□□□□□ -0.48
FBXO40-201ENST00000338040 TRIM41Q8WV44 630 aa12□□□□□ -0.49
FBXO40-201ENST00000338040 TTBK1Q5TCY1 1321 aaPredicted RBP11.97□□□□□ -0.49
FBXO40-201ENST00000338040 DAXXQ9UER7 740 aaPredicted RBP11.92□□□□□ -0.5
FBXO40-201ENST00000338040 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
FBXO40-201ENST00000338040 UBTFP17480 764 aaKnown RBP11.8□□□□□ -0.52
FBXO40-201ENST00000338040 DIEXFQ68CQ4 756 aaKnown RBP11.67□□□□□ -0.54
FBXO40-201ENST00000338040 RANGAP1P46060 587 aaPredicted RBP11.65□□□□□ -0.54
FBXO40-201ENST00000338040 ATP1B4Q9UN42 357 aaPredicted RBP11.65□□□□□ -0.54
FBXO40-201ENST00000338040 ZNF316A6NFI3 1004 aaPredicted RBP11.64□□□□□ -0.55
FBXO40-201ENST00000338040 CLSPNQ9HAW4 1339 aa11.59□□□□□ -0.55
FBXO40-201ENST00000338040 CHIC1Q5VXU3 224 aa11.55□□□□□ -0.56
FBXO40-201ENST00000338040 GTF3C3Q9Y5Q9 886 aa11.54□□□□□ -0.56
FBXO40-201ENST00000338040 PPARGC1BQ86YN6 1023 aaKnown RBP11.53□□□□□ -0.56
FBXO40-201ENST00000338040 MYT1LQ9UL68 1186 aa11.53□□□□□ -0.56
FBXO40-201ENST00000338040 CDK11AQ9UQ88 783 aaPredicted RBP11.52□□□□□ -0.57
FBXO40-201ENST00000338040 ACIN1Q9UKV3 1341 aaKnown RBP11.47□□□□□ -0.57
FBXO40-201ENST00000338040 HNRNPUL2Q1KMD3 747 aaKnown RBP11.43□□□□□ -0.58
FBXO40-201ENST00000338040 LOC105371045A0A1W2PR82 267 aa11.42□□□□□ -0.58
FBXO40-201ENST00000338040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.4□□□□□ -0.58
FBXO40-201ENST00000338040 POLR3GLQ9BT43 218 aa11.39□□□□□ -0.59
FBXO40-201ENST00000338040 GLIPR1L2Q4G1C9 344 aa11.38□□□□□ -0.59
FBXO40-201ENST00000338040 ANP32CO43423 234 aa11.38□□□□□ -0.59
FBXO40-201ENST00000338040 ITGAEP38570 1179 aa11.36□□□□□ -0.59
FBXO40-201ENST00000338040 ANP32AP39687 249 aaKnown RBP11.36□□□□□ -0.59
FBXO40-201ENST00000338040 BCANQ96GW7 911 aa11.3□□□□□ -0.6
FBXO40-201ENST00000338040 DCAF1Q9Y4B6 1507 aa11.22□□□□□ -0.61
FBXO40-201ENST00000338040 ANP32BQ92688 251 aaKnown RBP11.21□□□□□ -0.62
FBXO40-201ENST00000338040 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.62
FBXO40-201ENST00000338040 EIF5BO60841 1220 aaKnown RBP11.16□□□□□ -0.62
FBXO40-201ENST00000338040 FAM50AQ14320 339 aaKnown RBP11.16□□□□□ -0.62
FBXO40-201ENST00000338040 CNGB1Q14028 1251 aaPredicted RBP11.15□□□□□ -0.63
FBXO40-201ENST00000338040 NEUROD1Q13562 356 aa11.13□□□□□ -0.63
FBXO40-201ENST00000338040 TRIM52Q96A61 297 aa11.12□□□□□ -0.63
FBXO40-201ENST00000338040 CANXP27824 592 aaKnown RBP11.11□□□□□ -0.63
FBXO40-201ENST00000338040 SLC4A1APQ9BWU0 796 aaKnown RBP11.1□□□□□ -0.63
FBXO40-201ENST00000338040 FKBP8Q14318 412 aa11.1□□□□□ -0.63
FBXO40-201ENST00000338040 UPF2Q9HAU5 1272 aaKnown RBP11.07□□□□□ -0.64
FBXO40-201ENST00000338040 SCAF1Q9H7N4 1312 aaKnown RBP11.04□□□□□ -0.64
FBXO40-201ENST00000338040 NPM2Q86SE8 214 aaKnown RBP11.04□□□□□ -0.64
FBXO40-201ENST00000338040 ANP32EQ9BTT0 268 aa11.02□□□□□ -0.65
FBXO40-201ENST00000338040 NEFMP07197 916 aa11□□□□□ -0.65
FBXO40-201ENST00000338040 DDRGK1Q96HY6 314 aa10.99□□□□□ -0.65
FBXO40-201ENST00000338040 HSP90AA1P07900 732 aaKnown RBP10.96□□□□□ -0.65
FBXO40-201ENST00000338040 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.96□□□□□ -0.66
FBXO40-201ENST00000338040 HNRNPUQ00839 825 aaKnown RBP eCLIP10.94□□□□□ -0.66
FBXO40-201ENST00000338040 CCDC136Q96JN2 1154 aa10.94□□□□□ -0.66
FBXO40-201ENST00000338040 TONSLQ96HA7 1378 aa10.94□□□□□ -0.66
FBXO40-201ENST00000338040 NBR1Q14596 966 aa10.93□□□□□ -0.66
FBXO40-201ENST00000338040 ZNF326Q5BKZ1 582 aaKnown RBP10.92□□□□□ -0.66
FBXO40-201ENST00000338040 TNNT2P45379 298 aaPredicted RBP10.91□□□□□ -0.66
FBXO40-201ENST00000338040 CCDC180Q9P1Z9 1646 aa10.9□□□□□ -0.66
FBXO40-201ENST00000338040 CSRNP3Q8WYN3 585 aa10.9□□□□□ -0.67
FBXO40-201ENST00000338040 ZCCHC6Q5VYS8 1495 aaKnown RBP10.88□□□□□ -0.67
FBXO40-201ENST00000338040 PPM1GO15355 546 aaPredicted RBP10.88□□□□□ -0.67
FBXO40-201ENST00000338040 BECN1Q14457 450 aa10.88□□□□□ -0.67
FBXO40-201ENST00000338040 ERICH6BQ5W0A0 696 aa10.87□□□□□ -0.67
FBXO40-201ENST00000338040 TRIM44Q96DX7 344 aaPredicted RBP10.85□□□□□ -0.67
FBXO40-201ENST00000338040 DDX10Q13206 875 aaKnown RBP10.83□□□□□ -0.68
FBXO40-201ENST00000338040 FAM9BQ8IZU0 186 aa10.81□□□□□ -0.68
FBXO40-201ENST00000338040 MIER1Q8N108 512 aa10.8□□□□□ -0.68
FBXO40-201ENST00000338040 GOLGA6L22H0YM25 854 aa10.8□□□□□ -0.68
FBXO40-201ENST00000338040 TMC1Q8TDI8 760 aa10.79□□□□□ -0.68
FBXO40-201ENST00000338040 MRS2Q9HD23 443 aa10.76□□□□□ -0.69
FBXO40-201ENST00000338040 NCLP19338 710 aaKnown RBP10.76□□□□□ -0.69
FBXO40-201ENST00000338040 WDR43Q15061 677 aaKnown RBP eCLIP10.74□□□□□ -0.69
FBXO40-201ENST00000338040 BCL11AQ9H165 835 aa10.74□□□□□ -0.69
FBXO40-201ENST00000338040 NOP58Q9Y2X3 529 aaKnown RBP10.74□□□□□ -0.69
FBXO40-201ENST00000338040 PPP4R2Q9NY27 417 aa10.72□□□□□ -0.69
FBXO40-201ENST00000338040 MYH16Q9H6N6 1097 aa10.71□□□□□ -0.7
FBXO40-201ENST00000338040 NAP1L5Q96NT1 182 aaPredicted RBP10.69□□□□□ -0.7
FBXO40-201ENST00000338040 EEA1Q15075 1411 aa10.69□□□□□ -0.7
FBXO40-201ENST00000338040 L1TD1Q5T7N2 865 aaKnown RBP10.68□□□□□ -0.7
FBXO40-201ENST00000338040 SLC24A1O60721 1099 aa10.68□□□□□ -0.7
FBXO40-201ENST00000338040 EIF4G2P78344 907 aaKnown RBP eCLIP10.68□□□□□ -0.7
FBXO40-201ENST00000338040 ARXQ96QS3 562 aa10.67□□□□□ -0.7
FBXO40-201ENST00000338040 MYO15BQ96JP2 1530 aa10.66□□□□□ -0.7
FBXO40-201ENST00000338040 SUPT16HQ9Y5B9 1047 aaKnown RBP10.66□□□□□ -0.7
FBXO40-201ENST00000338040 PTMAP06454 111 aaKnown RBP10.65□□□□□ -0.7
FBXO40-201ENST00000338040 CDK11BP21127 795 aaKnown RBP10.64□□□□□ -0.71
FBXO40-201ENST00000338040 IRX6P78412 446 aaPredicted RBP10.63□□□□□ -0.71
FBXO40-201ENST00000338040 DEKP35659 375 aaKnown RBP10.62□□□□□ -0.71
FBXO40-201ENST00000338040 CASC1Q6TDU7 716 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms