RNA–Protein interactions for RNA: ENST00000585038.1

MICAL3-219, Transcript of microtubule associated monooxygenase, calponin and LIM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene MICAL3, Length 3,323 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MICAL3-219ENST00000585038 NISCHQ9Y2I1 1504 aa17■□□□□ 0.31
MICAL3-219ENST00000585038 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
MICAL3-219ENST00000585038 SHROOM4Q9ULL8 1493 aa15.44■□□□□ 0.06
MICAL3-219ENST00000585038 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
MICAL3-219ENST00000585038 CCDC180Q9P1Z9 1646 aa14.93□□□□□ -0.02
MICAL3-219ENST00000585038 EHMT2Q96KQ7 1210 aa14.51□□□□□ -0.09
MICAL3-219ENST00000585038 ZCCHC6Q5VYS8 1495 aaKnown RBP14.35□□□□□ -0.11
MICAL3-219ENST00000585038 FAM9AQ8IZU1 332 aaPredicted RBP14.2□□□□□ -0.14
MICAL3-219ENST00000585038 ABCC9O60706 1549 aa14.17□□□□□ -0.14
MICAL3-219ENST00000585038 DCAF1Q9Y4B6 1507 aa14.17□□□□□ -0.14
MICAL3-219ENST00000585038 LOC105371045A0A1W2PR82 267 aa14.05□□□□□ -0.16
MICAL3-219ENST00000585038 CHIC1Q5VXU3 224 aa14.04□□□□□ -0.16
MICAL3-219ENST00000585038 MYO15BQ96JP2 1530 aa13.97□□□□□ -0.17
MICAL3-219ENST00000585038 PCGF6Q9BYE7 350 aa13.92□□□□□ -0.18
MICAL3-219ENST00000585038 PABPN1Q86U42 306 aaKnown RBP eCLIP13.9□□□□□ -0.18
MICAL3-219ENST00000585038 TTBK1Q5TCY1 1321 aaPredicted RBP13.9□□□□□ -0.18
MICAL3-219ENST00000585038 PPARGC1BQ86YN6 1023 aaKnown RBP13.87□□□□□ -0.19
MICAL3-219ENST00000585038 TRIM41Q8WV44 630 aa13.81□□□□□ -0.2
MICAL3-219ENST00000585038 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
MICAL3-219ENST00000585038 NACADO15069 1562 aa13.73□□□□□ -0.21
MICAL3-219ENST00000585038 RANGAP1P46060 587 aaPredicted RBP13.72□□□□□ -0.21
MICAL3-219ENST00000585038 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
MICAL3-219ENST00000585038 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
MICAL3-219ENST00000585038 CECR2Q9BXF3 1484 aa13.52□□□□□ -0.25
MICAL3-219ENST00000585038 RSF1Q96T23 1441 aaPredicted RBP13.47□□□□□ -0.25
MICAL3-219ENST00000585038 UBTFP17480 764 aaKnown RBP13.39□□□□□ -0.27
MICAL3-219ENST00000585038 PELP1Q8IZL8 1130 aaKnown RBP13.38□□□□□ -0.27
MICAL3-219ENST00000585038 BICRAQ9NZM4 1560 aa13.36□□□□□ -0.27
MICAL3-219ENST00000585038 HRCP23327 699 aa13.29□□□□□ -0.28
MICAL3-219ENST00000585038 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
MICAL3-219ENST00000585038 TRIM26Q12899 539 aaPredicted RBP13.22□□□□□ -0.29
MICAL3-219ENST00000585038 SCAF1Q9H7N4 1312 aaKnown RBP13.22□□□□□ -0.29
MICAL3-219ENST00000585038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.19□□□□□ -0.3
MICAL3-219ENST00000585038 WIZO95785 1651 aa13.14□□□□□ -0.31
MICAL3-219ENST00000585038 CCER1Q8TC90 406 aaPredicted RBP13.11□□□□□ -0.31
MICAL3-219ENST00000585038 ATP1B4Q9UN42 357 aaPredicted RBP13.11□□□□□ -0.31
MICAL3-219ENST00000585038 SMARCA4P51532 1647 aa13.09□□□□□ -0.31
MICAL3-219ENST00000585038 HNRNPUL2Q1KMD3 747 aaKnown RBP13.08□□□□□ -0.32
MICAL3-219ENST00000585038 BAZ1AQ9NRL2 1556 aaPredicted RBP13.06□□□□□ -0.32
MICAL3-219ENST00000585038 ABCC8Q09428 1581 aa13.05□□□□□ -0.32
MICAL3-219ENST00000585038 PEG3Q9GZU2 1588 aa13.05□□□□□ -0.32
MICAL3-219ENST00000585038 ITGAEP38570 1179 aa13.03□□□□□ -0.32
MICAL3-219ENST00000585038 APLP2Q06481 763 aa13.02□□□□□ -0.33
MICAL3-219ENST00000585038 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
MICAL3-219ENST00000585038 SOGA1O94964 1423 aa12.99□□□□□ -0.33
MICAL3-219ENST00000585038 EIF4G1Q04637 1599 aaKnown RBP12.98□□□□□ -0.33
MICAL3-219ENST00000585038 CCDC88BA6NC98 1476 aa12.96□□□□□ -0.33
MICAL3-219ENST00000585038 P3H3Q8IVL6 736 aa12.93□□□□□ -0.34
MICAL3-219ENST00000585038 RUSC2Q8N2Y8 1516 aa12.92□□□□□ -0.34
MICAL3-219ENST00000585038 TOP2AP11388 1531 aaKnown RBP12.9□□□□□ -0.34
MICAL3-219ENST00000585038 MYT1Q01538 1121 aa12.85□□□□□ -0.35
MICAL3-219ENST00000585038 SMARCA2P51531 1590 aa12.84□□□□□ -0.35
MICAL3-219ENST00000585038 ARID3CA6NKF2 412 aa12.83□□□□□ -0.36
MICAL3-219ENST00000585038 BAZ1BQ9UIG0 1483 aaKnown RBP12.8□□□□□ -0.36
MICAL3-219ENST00000585038 YTHDC1Q96MU7 727 aaKnown RBP12.8□□□□□ -0.36
MICAL3-219ENST00000585038 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.365e-6■■■■■ 29.2
MICAL3-219ENST00000585038 PRKCSHP14314 528 aaPredicted RBP12.78□□□□□ -0.36
MICAL3-219ENST00000585038 DNAJC5BQ9UF47 199 aa12.77□□□□□ -0.36
MICAL3-219ENST00000585038 ATAD2BQ9ULI0 1458 aa12.76□□□□□ -0.37
MICAL3-219ENST00000585038 BCL11AQ9H165 835 aa12.75□□□□□ -0.37
MICAL3-219ENST00000585038 CEP162Q5TB80 1403 aa12.75□□□□□ -0.37
MICAL3-219ENST00000585038 HMGXB3Q12766 1538 aa12.71□□□□□ -0.37
MICAL3-219ENST00000585038 ZEB1P37275 1124 aaPredicted RBP12.69□□□□□ -0.38
MICAL3-219ENST00000585038 GTF3C3Q9Y5Q9 886 aa12.68□□□□□ -0.38
MICAL3-219ENST00000585038 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
MICAL3-219ENST00000585038 NCAPD3P42695 1498 aa12.66□□□□□ -0.38
MICAL3-219ENST00000585038 FAM50AQ14320 339 aaKnown RBP12.64□□□□□ -0.39
MICAL3-219ENST00000585038 PRDM2Q13029 1718 aa12.62□□□□□ -0.39
MICAL3-219ENST00000585038 CLIP1P30622 1438 aa12.61□□□□□ -0.39
MICAL3-219ENST00000585038 FBLN2P98095 1184 aa12.6□□□□□ -0.39
MICAL3-219ENST00000585038 KANK4Q5T7N3 995 aaPredicted RBP12.59□□□□□ -0.39
MICAL3-219ENST00000585038 CC2D2AQ9P2K1 1620 aa12.58□□□□□ -0.4
MICAL3-219ENST00000585038 RAPGEF2Q9Y4G8 1499 aa12.57□□□□□ -0.4
MICAL3-219ENST00000585038 DIEXFQ68CQ4 756 aaKnown RBP12.56□□□□□ -0.4
MICAL3-219ENST00000585038 TNIKQ9UKE5 1360 aa12.56□□□□□ -0.4
MICAL3-219ENST00000585038 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
MICAL3-219ENST00000585038 CNGB1Q14028 1251 aaPredicted RBP12.52□□□□□ -0.41
MICAL3-219ENST00000585038 SYNJ1O43426 1573 aa12.5□□□□□ -0.41
MICAL3-219ENST00000585038 HIRIP3Q9BW71 556 aaPredicted RBP12.49□□□□□ -0.41
MICAL3-219ENST00000585038 ACIN1Q9UKV3 1341 aaKnown RBP12.47□□□□□ -0.41
MICAL3-219ENST00000585038 CUX2O14529 1486 aa12.46□□□□□ -0.41
MICAL3-219ENST00000585038 TDRD9Q8NDG6 1382 aaKnown RBP12.45□□□□□ -0.42
MICAL3-219ENST00000585038 BIVM-ERCC5R4GMW8 1640 aa12.44□□□□□ -0.42
MICAL3-219ENST00000585038 CEP164Q9UPV0 1460 aa12.44□□□□□ -0.42
MICAL3-219ENST00000585038 NESP48681 1621 aa12.44□□□□□ -0.42
MICAL3-219ENST00000585038 CHIC2Q9UKJ5 165 aa12.42□□□□□ -0.42
MICAL3-219ENST00000585038 CFTRP13569 1480 aa12.4□□□□□ -0.42
MICAL3-219ENST00000585038 KIF27Q86VH2 1401 aa12.4□□□□□ -0.42
MICAL3-219ENST00000585038 EEA1Q15075 1411 aa12.38□□□□□ -0.43
MICAL3-219ENST00000585038 RAD54L2Q9Y4B4 1467 aa12.37□□□□□ -0.43
MICAL3-219ENST00000585038 TOP2BQ02880 1626 aa12.37□□□□□ -0.43
MICAL3-219ENST00000585038 CADPSQ9ULU8 1353 aa12.37□□□□□ -0.43
MICAL3-219ENST00000585038 CARMIL1Q5VZK9 1371 aa12.36□□□□□ -0.43
MICAL3-219ENST00000585038 ZNF316A6NFI3 1004 aaPredicted RBP12.35□□□□□ -0.43
MICAL3-219ENST00000585038 SIN3AQ96ST3 1273 aa12.34□□□□□ -0.43
MICAL3-219ENST00000585038 MIER1Q8N108 512 aa12.33□□□□□ -0.44
MICAL3-219ENST00000585038 VPS8Q8N3P4 1428 aa12.32□□□□□ -0.44
MICAL3-219ENST00000585038 TRIM52Q96A61 297 aa12.31□□□□□ -0.44
MICAL3-219ENST00000585038 ZNF777Q9ULD5 760 aaPredicted RBP12.31□□□□□ -0.44
MICAL3-219ENST00000585038 CENPBP07199 599 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms