RNA–Protein interactions for RNA: ENST00000382183.6

SMARCA2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-205ENST00000382183 AEBP2Q6ZN18 517 aaPredicted RBP23.07■■□□□ 1.28
SMARCA2-205ENST00000382183 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
SMARCA2-205ENST00000382183 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
SMARCA2-205ENST00000382183 NISCHQ9Y2I1 1504 aa19.6■□□□□ 0.73
SMARCA2-205ENST00000382183 PHF23Q9BUL5 403 aaPredicted RBP19.55■□□□□ 0.72
SMARCA2-205ENST00000382183 FOXD1Q16676 465 aa18.3■□□□□ 0.52
SMARCA2-205ENST00000382183 PLPPR3Q6T4P5 718 aa18.18■□□□□ 0.5
SMARCA2-205ENST00000382183 ADRA2BP18089 450 aa17.34■□□□□ 0.37
SMARCA2-205ENST00000382183 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
SMARCA2-205ENST00000382183 PIAS4Q8N2W9 510 aaPredicted RBP17.29■□□□□ 0.36
SMARCA2-205ENST00000382183 CCDC180Q9P1Z9 1646 aa17.26■□□□□ 0.35
SMARCA2-205ENST00000382183 MSH5O43196 834 aa17.17■□□□□ 0.34
SMARCA2-205ENST00000382183 ABCC9O60706 1549 aa16.88■□□□□ 0.29
SMARCA2-205ENST00000382183 DCAF8L2P0C7V8 631 aa16.4■□□□□ 0.22
SMARCA2-205ENST00000382183 ZCCHC6Q5VYS8 1495 aaKnown RBP16.35■□□□□ 0.21
SMARCA2-205ENST00000382183 NACADO15069 1562 aa16.26■□□□□ 0.19
SMARCA2-205ENST00000382183 RB1CC1Q8TDY2 1594 aa16.23■□□□□ 0.19
SMARCA2-205ENST00000382183 MYO15BQ96JP2 1530 aa16.22■□□□□ 0.19
SMARCA2-205ENST00000382183 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
SMARCA2-205ENST00000382183 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
SMARCA2-205ENST00000382183 POTEDQ86YR6 584 aa15.94■□□□□ 0.14
SMARCA2-205ENST00000382183 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
SMARCA2-205ENST00000382183 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
SMARCA2-205ENST00000382183 SCRIBQ14160 1630 aa15.82■□□□□ 0.12
SMARCA2-205ENST00000382183 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
SMARCA2-205ENST00000382183 UNC13AQ9UPW8 1703 aa15.76■□□□□ 0.11
SMARCA2-205ENST00000382183 DMRT2Q9Y5R5 561 aa15.75■□□□□ 0.11
SMARCA2-205ENST00000382183 BICRAQ9NZM4 1560 aa15.75■□□□□ 0.11
SMARCA2-205ENST00000382183 SHROOM4Q9ULL8 1493 aa15.62■□□□□ 0.09
SMARCA2-205ENST00000382183 CNKSR2Q8WXI2 1034 aa15.59■□□□□ 0.09
SMARCA2-205ENST00000382183 NCBP3Q53F19 620 aaKnown RBP15.58■□□□□ 0.08
SMARCA2-205ENST00000382183 DNAJC5BQ9UF47 199 aa15.42■□□□□ 0.06
SMARCA2-205ENST00000382183 RNF216Q9NWF9 866 aaPredicted RBP15.33■□□□□ 0.04
SMARCA2-205ENST00000382183 EIF4G1Q04637 1599 aaKnown RBP15.32■□□□□ 0.04
SMARCA2-205ENST00000382183 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
SMARCA2-205ENST00000382183 CECR2Q9BXF3 1484 aa15.28■□□□□ 0.04
SMARCA2-205ENST00000382183 CC2D2AQ9P2K1 1620 aa15.22■□□□□ 0.03
SMARCA2-205ENST00000382183 KCNA4P22459 653 aa15.21■□□□□ 0.03
SMARCA2-205ENST00000382183 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
SMARCA2-205ENST00000382183 NPM3O75607 178 aaKnown RBP15.15■□□□□ 0.02
SMARCA2-205ENST00000382183 SMARCA4P51532 1647 aa15.14■□□□□ 0.01
SMARCA2-205ENST00000382183 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
SMARCA2-205ENST00000382183 MROH2BQ7Z745 1585 aa15.11■□□□□ 0.01
SMARCA2-205ENST00000382183 ATAD2BQ9ULI0 1458 aa15.08■□□□□ 0
SMARCA2-205ENST00000382183 NCAPD3P42695 1498 aa15.05■□□□□ -0
SMARCA2-205ENST00000382183 SMARCA2P51531 1590 aa15.02■□□□□ -0
SMARCA2-205ENST00000382183 RSF1Q96T23 1441 aaPredicted RBP15.01□□□□□ -0.01
SMARCA2-205ENST00000382183 PEG3Q9GZU2 1588 aa14.98□□□□□ -0.01
SMARCA2-205ENST00000382183 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
SMARCA2-205ENST00000382183 HMGXB3Q12766 1538 aa14.94□□□□□ -0.02
SMARCA2-205ENST00000382183 WIZO95785 1651 aa14.9□□□□□ -0.02
SMARCA2-205ENST00000382183 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
SMARCA2-205ENST00000382183 SUPT5HO00267 1087 aaKnown RBP14.79□□□□□ -0.04
SMARCA2-205ENST00000382183 TOP2AP11388 1531 aaKnown RBP14.78□□□□□ -0.04
SMARCA2-205ENST00000382183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.06
SMARCA2-205ENST00000382183 CCDC88BA6NC98 1476 aa14.64□□□□□ -0.07
SMARCA2-205ENST00000382183 CADPSQ9ULU8 1353 aa14.64□□□□□ -0.07
SMARCA2-205ENST00000382183 NESP48681 1621 aa14.63□□□□□ -0.07
SMARCA2-205ENST00000382183 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
SMARCA2-205ENST00000382183 RNF39Q9H2S5 420 aa14.58□□□□□ -0.08
SMARCA2-205ENST00000382183 LAMC3Q9Y6N6 1575 aa14.57□□□□□ -0.08
SMARCA2-205ENST00000382183 CFTRP13569 1480 aa14.56□□□□□ -0.08
SMARCA2-205ENST00000382183 ERCC6Q03468 1493 aa14.53□□□□□ -0.08
SMARCA2-205ENST00000382183 PDS5BQ9NTI5 1447 aa14.53□□□□□ -0.08
SMARCA2-205ENST00000382183 C1QBPQ07021 282 aaKnown RBP14.48□□□□□ -0.09
SMARCA2-205ENST00000382183 CACNB1Q02641 598 aaPredicted RBP14.45□□□□□ -0.1
SMARCA2-205ENST00000382183 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
SMARCA2-205ENST00000382183 CSRNP3Q8WYN3 585 aa14.43□□□□□ -0.1
SMARCA2-205ENST00000382183 CEP164Q9UPV0 1460 aa14.39□□□□□ -0.11
SMARCA2-205ENST00000382183 KIF21AQ7Z4S6 1674 aa14.37□□□□□ -0.11
SMARCA2-205ENST00000382183 MRC2Q9UBG0 1479 aa14.35□□□□□ -0.11
SMARCA2-205ENST00000382183 THOC2Q8NI27 1593 aaKnown RBP14.33□□□□□ -0.12
SMARCA2-205ENST00000382183 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
SMARCA2-205ENST00000382183 CUX2O14529 1486 aa14.31□□□□□ -0.12
SMARCA2-205ENST00000382183 PRDM2Q13029 1718 aa14.29□□□□□ -0.12
SMARCA2-205ENST00000382183 WDR62O43379 1518 aa14.28□□□□□ -0.12
SMARCA2-205ENST00000382183 URB2Q14146 1524 aaKnown RBP14.28□□□□□ -0.12
SMARCA2-205ENST00000382183 U3KPZ7 1027 aaPredicted RBP14.28□□□□□ -0.12
SMARCA2-205ENST00000382183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.25□□□□□ -0.13
SMARCA2-205ENST00000382183 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
SMARCA2-205ENST00000382183 APLP2Q06481 763 aa14.23□□□□□ -0.13
SMARCA2-205ENST00000382183 TOPBP1Q92547 1522 aa14.22□□□□□ -0.13
SMARCA2-205ENST00000382183 ABCC8Q09428 1581 aa14.22□□□□□ -0.13
SMARCA2-205ENST00000382183 DNMBPQ6XZF7 1577 aa14.18□□□□□ -0.14
SMARCA2-205ENST00000382183 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
SMARCA2-205ENST00000382183 CUX1P39880 1505 aa14.15□□□□□ -0.14
SMARCA2-205ENST00000382183 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
SMARCA2-205ENST00000382183 SAMD1Q6SPF0 538 aaPredicted RBP14.13□□□□□ -0.15
SMARCA2-205ENST00000382183 MYCNP04198 464 aaPredicted RBP14.12□□□□□ -0.15
SMARCA2-205ENST00000382183 POLA1P09884 1462 aaPredicted RBP14.12□□□□□ -0.15
SMARCA2-205ENST00000382183 FGD5Q6ZNL6 1462 aa14.1□□□□□ -0.15
SMARCA2-205ENST00000382183 IFT140Q96RY7 1462 aa14.1□□□□□ -0.15
SMARCA2-205ENST00000382183 SOGA1O94964 1423 aa14.08□□□□□ -0.15
SMARCA2-205ENST00000382183 RAD54L2Q9Y4B4 1467 aa14.07□□□□□ -0.16
SMARCA2-205ENST00000382183 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
SMARCA2-205ENST00000382183 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
SMARCA2-205ENST00000382183 ZNF608Q9ULD9 1512 aaPredicted RBP14.03□□□□□ -0.16
SMARCA2-205ENST00000382183 CAPN15O75808 1086 aa14.01□□□□□ -0.17
SMARCA2-205ENST00000382183 TARBP1Q13395 1621 aaKnown RBP14.01□□□□□ -0.17
SMARCA2-205ENST00000382183 BIVM-ERCC5R4GMW8 1640 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms