RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
TNPO1-201ENST00000337273 DCAF8L2P0C7V8 631 aa13.11□□□□□ -0.31
TNPO1-201ENST00000337273 PELP1Q8IZL8 1130 aaKnown RBP13.01□□□□□ -0.33
TNPO1-201ENST00000337273 TTBK1Q5TCY1 1321 aaPredicted RBP12.99□□□□□ -0.33
TNPO1-201ENST00000337273 SUPT5HO00267 1087 aaKnown RBP12.93□□□□□ -0.34
TNPO1-201ENST00000337273 SHROOM4Q9ULL8 1493 aa12.91□□□□□ -0.34
TNPO1-201ENST00000337273 PCGF6Q9BYE7 350 aa12.7□□□□□ -0.38
TNPO1-201ENST00000337273 NISCHQ9Y2I1 1504 aa12.69□□□□□ -0.38
TNPO1-201ENST00000337273 MYT1Q01538 1121 aa12.68□□□□□ -0.38
TNPO1-201ENST00000337273 YTHDC1Q96MU7 727 aaKnown RBP12.67□□□□□ -0.38
TNPO1-201ENST00000337273 PPARGC1BQ86YN6 1023 aaKnown RBP12.49□□□□□ -0.41
TNPO1-201ENST00000337273 FAM9AQ8IZU1 332 aaPredicted RBP12.44□□□□□ -0.42
TNPO1-201ENST00000337273 APLP2Q06481 763 aa12.42□□□□□ -0.42
TNPO1-201ENST00000337273 CCER1Q8TC90 406 aaPredicted RBP12.4□□□□□ -0.42
TNPO1-201ENST00000337273 ZEB1P37275 1124 aaPredicted RBP12.39□□□□□ -0.43
TNPO1-201ENST00000337273 CENPBP07199 599 aaPredicted RBP12.36□□□□□ -0.43
TNPO1-201ENST00000337273 RANGAP1P46060 587 aaPredicted RBP12.35□□□□□ -0.43
TNPO1-201ENST00000337273 ERICH6Q7L0X2 663 aa12.26□□□□□ -0.45
TNPO1-201ENST00000337273 CNGB1Q14028 1251 aaPredicted RBP12.04□□□□□ -0.48
TNPO1-201ENST00000337273 NEFLP07196 543 aa12.01□□□□□ -0.49
TNPO1-201ENST00000337273 BCANQ96GW7 911 aa12.01□□□□□ -0.49
TNPO1-201ENST00000337273 TRIM41Q8WV44 630 aa11.9□□□□□ -0.5
TNPO1-201ENST00000337273 HRCP23327 699 aa11.85□□□□□ -0.51
TNPO1-201ENST00000337273 LOC105371045A0A1W2PR82 267 aa11.79□□□□□ -0.52
TNPO1-201ENST00000337273 TRIM26Q12899 539 aaPredicted RBP11.78□□□□□ -0.52
TNPO1-201ENST00000337273 POLR3GLQ9BT43 218 aa11.72□□□□□ -0.53
TNPO1-201ENST00000337273 UBTFP17480 764 aaKnown RBP11.71□□□□□ -0.53
TNPO1-201ENST00000337273 GTF3C3Q9Y5Q9 886 aa11.71□□□□□ -0.53
TNPO1-201ENST00000337273 DAXXQ9UER7 740 aaPredicted RBP11.71□□□□□ -0.53
TNPO1-201ENST00000337273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
TNPO1-201ENST00000337273 ATP1B4Q9UN42 357 aaPredicted RBP11.69□□□□□ -0.54
TNPO1-201ENST00000337273 ITGAEP38570 1179 aa11.65□□□□□ -0.54
TNPO1-201ENST00000337273 HNRNPUL2Q1KMD3 747 aaKnown RBP11.57□□□□□ -0.56
TNPO1-201ENST00000337273 BCL11AQ9H165 835 aa11.54□□□□□ -0.56
TNPO1-201ENST00000337273 SCAF1Q9H7N4 1312 aaKnown RBP11.51□□□□□ -0.57
TNPO1-201ENST00000337273 RTL5Q5HYW3 569 aaPredicted RBP11.49□□□□□ -0.57
TNPO1-201ENST00000337273 DIEXFQ68CQ4 756 aaKnown RBP11.42□□□□□ -0.58
TNPO1-201ENST00000337273 CHIC1Q5VXU3 224 aa11.42□□□□□ -0.58
TNPO1-201ENST00000337273 EIF5BO60841 1220 aaKnown RBP11.42□□□□□ -0.58
TNPO1-201ENST00000337273 ARXQ96QS3 562 aa11.4□□□□□ -0.58
TNPO1-201ENST00000337273 ZNF316A6NFI3 1004 aaPredicted RBP11.4□□□□□ -0.58
TNPO1-201ENST00000337273 SENP3-EIF4A1A0A087X0R7 540 aa11.39□□□□□ -0.59
TNPO1-201ENST00000337273 NBR1Q14596 966 aa11.38□□□□□ -0.59
TNPO1-201ENST00000337273 NPM2Q86SE8 214 aaKnown RBP11.38□□□□□ -0.59
TNPO1-201ENST00000337273 RTN4Q9NQC3 1192 aaKnown RBP11.33□□□□□ -0.6
TNPO1-201ENST00000337273 IRX6P78412 446 aaPredicted RBP11.31□□□□□ -0.6
TNPO1-201ENST00000337273 CLSPNQ9HAW4 1339 aa11.29□□□□□ -0.6
TNPO1-201ENST00000337273 NEUROD1Q13562 356 aa11.29□□□□□ -0.6
TNPO1-201ENST00000337273 ACIN1Q9UKV3 1341 aaKnown RBP11.28□□□□□ -0.6
TNPO1-201ENST00000337273 CDK11AQ9UQ88 783 aaPredicted RBP11.25□□□□□ -0.61
TNPO1-201ENST00000337273 MYT1LQ9UL68 1186 aa11.19□□□□□ -0.62
TNPO1-201ENST00000337273 ANP32CO43423 234 aa11.18□□□□□ -0.62
TNPO1-201ENST00000337273 SLC4A1APQ9BWU0 796 aaKnown RBP11.14□□□□□ -0.63
TNPO1-201ENST00000337273 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.13□□□□□ -0.63
TNPO1-201ENST00000337273 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
TNPO1-201ENST00000337273 ZNF326Q5BKZ1 582 aaKnown RBP11.12□□□□□ -0.63
TNPO1-201ENST00000337273 AMER1Q5JTC6 1135 aaPredicted RBP11.1□□□□□ -0.63
TNPO1-201ENST00000337273 ANP32AP39687 249 aaKnown RBP11.09□□□□□ -0.63
TNPO1-201ENST00000337273 FKBP8Q14318 412 aa11.08□□□□□ -0.64
TNPO1-201ENST00000337273 CCDC136Q96JN2 1154 aa11.07□□□□□ -0.64
TNPO1-201ENST00000337273 FAM50AQ14320 339 aaKnown RBP11.06□□□□□ -0.64
TNPO1-201ENST00000337273 ARID4BQ4LE39 1312 aaPredicted RBP11.04□□□□□ -0.64
TNPO1-201ENST00000337273 GLIPR1L2Q4G1C9 344 aa11.04□□□□□ -0.64
TNPO1-201ENST00000337273 TRIM52Q96A61 297 aa11.04□□□□□ -0.64
TNPO1-201ENST00000337273 HIRIP3Q9BW71 556 aaPredicted RBP11.03□□□□□ -0.64
TNPO1-201ENST00000337273 ANP32BQ92688 251 aaKnown RBP11.02□□□□□ -0.65
TNPO1-201ENST00000337273 ARID3CA6NKF2 412 aa11.02□□□□□ -0.65
TNPO1-201ENST00000337273 NEFMP07197 916 aa11□□□□□ -0.65
TNPO1-201ENST00000337273 SENP3Q9H4L4 574 aaPredicted RBP11□□□□□ -0.65
TNPO1-201ENST00000337273 ARID3AQ99856 593 aa10.99□□□□□ -0.65
TNPO1-201ENST00000337273 SALL2Q9Y467 1007 aaPredicted RBP10.97□□□□□ -0.65
TNPO1-201ENST00000337273 TPRNQ4KMQ1 711 aa10.97□□□□□ -0.65
TNPO1-201ENST00000337273 MYO15BQ96JP2 1530 aa10.95□□□□□ -0.66
TNPO1-201ENST00000337273 CANXP27824 592 aaKnown RBP10.95□□□□□ -0.66
TNPO1-201ENST00000337273 LAS1LQ9Y4W2 734 aaKnown RBP10.95□□□□□ -0.66
TNPO1-201ENST00000337273 MIER1Q8N108 512 aa10.94□□□□□ -0.66
TNPO1-201ENST00000337273 UPF2Q9HAU5 1272 aaKnown RBP10.93□□□□□ -0.66
TNPO1-201ENST00000337273 ZBTB7CA1YPR0 619 aa10.9□□□□□ -0.66
TNPO1-201ENST00000337273 DCAF1Q9Y4B6 1507 aa10.89□□□□□ -0.67
TNPO1-201ENST00000337273 CSRNP3Q8WYN3 585 aa10.85□□□□□ -0.67
TNPO1-201ENST00000337273 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.84□□□□□ -0.67
TNPO1-201ENST00000337273 HSP90AA1P07900 732 aaKnown RBP10.81□□□□□ -0.68
TNPO1-201ENST00000337273 ANP32EQ9BTT0 268 aa10.81□□□□□ -0.68
TNPO1-201ENST00000337273 TONSLQ96HA7 1378 aa10.8□□□□□ -0.68
TNPO1-201ENST00000337273 FAM9BQ8IZU0 186 aa10.8□□□□□ -0.68
TNPO1-201ENST00000337273 DDX10Q13206 875 aaKnown RBP10.79□□□□□ -0.68
TNPO1-201ENST00000337273 SLC24A1O60721 1099 aa10.76□□□□□ -0.69
TNPO1-201ENST00000337273 P3H3Q8IVL6 736 aa10.75□□□□□ -0.69
TNPO1-201ENST00000337273 HNRNPUQ00839 825 aaKnown RBP eCLIP10.73□□□□□ -0.69
TNPO1-201ENST00000337273 DDRGK1Q96HY6 314 aa10.72□□□□□ -0.69
TNPO1-201ENST00000337273 DEKP35659 375 aaKnown RBP10.7□□□□□ -0.7
TNPO1-201ENST00000337273 NAP1L5Q96NT1 182 aaPredicted RBP10.69□□□□□ -0.7
TNPO1-201ENST00000337273 TMC1Q8TDI8 760 aa10.68□□□□□ -0.7
TNPO1-201ENST00000337273 BECN1Q14457 450 aa10.67□□□□□ -0.7
TNPO1-201ENST00000337273 SPRYD3Q8NCJ5 442 aa10.66□□□□□ -0.7
TNPO1-201ENST00000337273 PLEKHG5O94827 1062 aa10.66□□□□□ -0.7
TNPO1-201ENST00000337273 WDR43Q15061 677 aaKnown RBP eCLIP10.64□□□□□ -0.71
TNPO1-201ENST00000337273 TRIM44Q96DX7 344 aaPredicted RBP10.63□□□□□ -0.71
TNPO1-201ENST00000337273 GOLGA6L22H0YM25 854 aa10.62□□□□□ -0.71
TNPO1-201ENST00000337273 TAOK2Q9UL54 1235 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms