RNA–Protein interactions for RNA: ENST00000556489.3

PROX2-202, Transcript of prospero homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROX2, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROX2-202ENST00000556489 NISCHQ9Y2I1 1504 aa17.32■□□□□ 0.36
PROX2-202ENST00000556489 SHROOM4Q9ULL8 1493 aa15.75■□□□□ 0.11
PROX2-202ENST00000556489 SUPT5HO00267 1087 aaKnown RBP15.54■□□□□ 0.08
PROX2-202ENST00000556489 DCAF8L2P0C7V8 631 aa15.26■□□□□ 0.03
PROX2-202ENST00000556489 PCGF6Q9BYE7 350 aa14.92□□□□□ -0.02
PROX2-202ENST00000556489 MYO15BQ96JP2 1530 aa14.89□□□□□ -0.03
PROX2-202ENST00000556489 CHIC1Q5VXU3 224 aa14.87□□□□□ -0.03
PROX2-202ENST00000556489 PPARGC1BQ86YN6 1023 aaKnown RBP14.87□□□□□ -0.03
PROX2-202ENST00000556489 LOC105371045A0A1W2PR82 267 aa14.79□□□□□ -0.04
PROX2-202ENST00000556489 HRCP23327 699 aa14.72□□□□□ -0.05
PROX2-202ENST00000556489 EHMT2Q96KQ7 1210 aa14.68□□□□□ -0.06
PROX2-202ENST00000556489 ZCCHC6Q5VYS8 1495 aaKnown RBP14.61□□□□□ -0.07
PROX2-202ENST00000556489 FAM9AQ8IZU1 332 aaPredicted RBP14.48□□□□□ -0.09
PROX2-202ENST00000556489 TRIM26Q12899 539 aaPredicted RBP14.2□□□□□ -0.14
PROX2-202ENST00000556489 CCDC180Q9P1Z9 1646 aa14.2□□□□□ -0.14
PROX2-202ENST00000556489 TRIM41Q8WV44 630 aa14.19□□□□□ -0.14
PROX2-202ENST00000556489 TTBK1Q5TCY1 1321 aaPredicted RBP14.17□□□□□ -0.14
PROX2-202ENST00000556489 DCAF1Q9Y4B6 1507 aa14.08□□□□□ -0.16
PROX2-202ENST00000556489 SCRIBQ14160 1630 aa13.98□□□□□ -0.17
PROX2-202ENST00000556489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.97□□□□□ -0.17
PROX2-202ENST00000556489 RSF1Q96T23 1441 aaPredicted RBP13.96□□□□□ -0.17
PROX2-202ENST00000556489 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.18
PROX2-202ENST00000556489 RB1CC1Q8TDY2 1594 aa13.87□□□□□ -0.19
PROX2-202ENST00000556489 CECR2Q9BXF3 1484 aa13.83□□□□□ -0.2
PROX2-202ENST00000556489 ABCC9O60706 1549 aa13.81□□□□□ -0.2
PROX2-202ENST00000556489 CCER1Q8TC90 406 aaPredicted RBP13.8□□□□□ -0.2
PROX2-202ENST00000556489 ZEB1P37275 1124 aaPredicted RBP13.75□□□□□ -0.21
PROX2-202ENST00000556489 RANGAP1P46060 587 aaPredicted RBP13.7□□□□□ -0.22
PROX2-202ENST00000556489 NEUROD1Q13562 356 aa13.68□□□□□ -0.22
PROX2-202ENST00000556489 MROH2BQ7Z745 1585 aa13.67□□□□□ -0.22
PROX2-202ENST00000556489 YTHDC1Q96MU7 727 aaKnown RBP13.63□□□□□ -0.23
PROX2-202ENST00000556489 WIZO95785 1651 aa13.6□□□□□ -0.23
PROX2-202ENST00000556489 UBTFP17480 764 aaKnown RBP13.59□□□□□ -0.23
PROX2-202ENST00000556489 DIEXFQ68CQ4 756 aaKnown RBP13.58□□□□□ -0.24
PROX2-202ENST00000556489 GTF3C3Q9Y5Q9 886 aa13.57□□□□□ -0.24
PROX2-202ENST00000556489 HNRNPUL2Q1KMD3 747 aaKnown RBP13.54□□□□□ -0.24
PROX2-202ENST00000556489 PABPN1Q86U42 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
PROX2-202ENST00000556489 ABCC8Q09428 1581 aa13.53□□□□□ -0.24
PROX2-202ENST00000556489 ACIN1Q9UKV3 1341 aaKnown RBP13.53□□□□□ -0.24
PROX2-202ENST00000556489 CCDC88BA6NC98 1476 aa13.5□□□□□ -0.25
PROX2-202ENST00000556489 SOGA1O94964 1423 aa13.5□□□□□ -0.25
PROX2-202ENST00000556489 PELP1Q8IZL8 1130 aaKnown RBP13.5□□□□□ -0.25
PROX2-202ENST00000556489 RUSC2Q8N2Y8 1516 aa13.47□□□□□ -0.25
PROX2-202ENST00000556489 CEP162Q5TB80 1403 aa13.39□□□□□ -0.27
PROX2-202ENST00000556489 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
PROX2-202ENST00000556489 MIER1Q8N108 512 aa13.36□□□□□ -0.27
PROX2-202ENST00000556489 CENPBP07199 599 aaPredicted RBP13.32□□□□□ -0.28
PROX2-202ENST00000556489 ZNF316A6NFI3 1004 aaPredicted RBP13.31□□□□□ -0.28
PROX2-202ENST00000556489 NACADO15069 1562 aa13.26□□□□□ -0.29
PROX2-202ENST00000556489 ITGAEP38570 1179 aa13.23□□□□□ -0.29
PROX2-202ENST00000556489 BAZ1AQ9NRL2 1556 aaPredicted RBP13.22□□□□□ -0.29
PROX2-202ENST00000556489 TNIKQ9UKE5 1360 aa13.2□□□□□ -0.3
PROX2-202ENST00000556489 APLP2Q06481 763 aa13.18□□□□□ -0.3
PROX2-202ENST00000556489 EIF4G1Q04637 1599 aaKnown RBP13.17□□□□□ -0.3
PROX2-202ENST00000556489 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
PROX2-202ENST00000556489 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
PROX2-202ENST00000556489 TOP2AP11388 1531 aaKnown RBP13.12□□□□□ -0.31
PROX2-202ENST00000556489 KANK4Q5T7N3 995 aaPredicted RBP13.11□□□□□ -0.31
PROX2-202ENST00000556489 SMARCA4P51532 1647 aa13.1□□□□□ -0.31
PROX2-202ENST00000556489 CLIP1P30622 1438 aa13.09□□□□□ -0.31
PROX2-202ENST00000556489 MYT1Q01538 1121 aa13.08□□□□□ -0.32
PROX2-202ENST00000556489 KCNH8Q96L42 1107 aa13.08□□□□□ -0.32
PROX2-202ENST00000556489 GOLGA3Q08378 1498 aa13.07□□□□□ -0.32
PROX2-202ENST00000556489 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
PROX2-202ENST00000556489 HIRIP3Q9BW71 556 aaPredicted RBP13.03□□□□□ -0.32
PROX2-202ENST00000556489 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
PROX2-202ENST00000556489 BCANQ96GW7 911 aa13□□□□□ -0.33
PROX2-202ENST00000556489 ATP1B4Q9UN42 357 aaPredicted RBP12.99□□□□□ -0.33
PROX2-202ENST00000556489 P3H3Q8IVL6 736 aa12.96□□□□□ -0.33
PROX2-202ENST00000556489 VPS8Q8N3P4 1428 aa12.94□□□□□ -0.34
PROX2-202ENST00000556489 UNC13AQ9UPW8 1703 aa12.94□□□□□ -0.34
PROX2-202ENST00000556489 CEP164Q9UPV0 1460 aa12.94□□□□□ -0.34
PROX2-202ENST00000556489 EEA1Q15075 1411 aa12.92□□□□□ -0.34
PROX2-202ENST00000556489 SUPT16HQ9Y5B9 1047 aaKnown RBP12.89□□□□□ -0.35
PROX2-202ENST00000556489 DHX57Q6P158 1386 aaKnown RBP12.89□□□□□ -0.35
PROX2-202ENST00000556489 SIN3AQ96ST3 1273 aa12.89□□□□□ -0.35
PROX2-202ENST00000556489 KIF21BO75037 1637 aa12.87□□□□□ -0.35
PROX2-202ENST00000556489 DDX10Q13206 875 aaKnown RBP12.86□□□□□ -0.35
PROX2-202ENST00000556489 BICRAQ9NZM4 1560 aa12.85□□□□□ -0.35
PROX2-202ENST00000556489 FAM50AQ14320 339 aaKnown RBP12.85□□□□□ -0.35
PROX2-202ENST00000556489 BAZ1BQ9UIG0 1483 aaKnown RBP12.84□□□□□ -0.35
PROX2-202ENST00000556489 ATAD2BQ9ULI0 1458 aa12.84□□□□□ -0.35
PROX2-202ENST00000556489 ARAP1Q96P48 1450 aa12.81□□□□□ -0.36
PROX2-202ENST00000556489 TRIM52Q96A61 297 aa12.8□□□□□ -0.36
PROX2-202ENST00000556489 FKBP8Q14318 412 aa12.75□□□□□ -0.37
PROX2-202ENST00000556489 TSHZ2Q9NRE2 1034 aa12.75□□□□□ -0.37
PROX2-202ENST00000556489 RAB3GAP2Q9H2M9 1393 aa12.72□□□□□ -0.37
PROX2-202ENST00000556489 CCNB3Q8WWL7 1395 aa12.71□□□□□ -0.37
PROX2-202ENST00000556489 CNGB1Q14028 1251 aaPredicted RBP12.7□□□□□ -0.38
PROX2-202ENST00000556489 IRX6P78412 446 aaPredicted RBP12.7□□□□□ -0.38
PROX2-202ENST00000556489 ARID3CA6NKF2 412 aa12.68□□□□□ -0.38
PROX2-202ENST00000556489 SENP3-EIF4A1A0A087X0R7 540 aa12.67□□□□□ -0.38
PROX2-202ENST00000556489 PRXQ9BXM0 1461 aa12.67□□□□□ -0.38
PROX2-202ENST00000556489 ARHGAP35Q9NRY4 1499 aa12.65□□□□□ -0.38
PROX2-202ENST00000556489 CUX1P39880 1505 aa12.65□□□□□ -0.38
PROX2-202ENST00000556489 ERICH6Q7L0X2 663 aa12.63□□□□□ -0.39
PROX2-202ENST00000556489 PHLDB1Q86UU1 1377 aa12.63□□□□□ -0.39
PROX2-202ENST00000556489 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
PROX2-202ENST00000556489 KIF27Q86VH2 1401 aa12.63□□□□□ -0.39
PROX2-202ENST00000556489 CUX2O14529 1486 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms