Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 SNX5-217ENST00000606557 1087 ntBASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 AL031602.1-201ENST00000633169 911 ntBASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 AC120498.9-201ENST00000339021 3867 ntBASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.23■□□□□ 0.67
LRCH1Q9Y2L9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.22■□□□□ 0.67
LRCH1Q9Y2L9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 MIR6722-201ENST00000617286 78 ntBASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCH1Q9Y2L9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH1Q9Y2L9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms