Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC27.86■■■□□ 2.05
NINLQ9Y2I6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC27.85■■■□□ 2.05
NINLQ9Y2I6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC27.85■■■□□ 2.05
NINLQ9Y2I6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC27.85■■■□□ 2.05
NINLQ9Y2I6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
NINLQ9Y2I6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
NINLQ9Y2I6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
NINLQ9Y2I6 C1QBPP2-201ENST00000528754 825 ntBASIC27.85■■■□□ 2.05
NINLQ9Y2I6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 AC133681.1-201ENST00000465482 601 ntBASIC27.84■■■□□ 2.05
NINLQ9Y2I6 HES2-206ENST00000489730 730 ntTSL 2 BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 PTBP1P-201ENST00000554374 1601 ntBASIC27.84■■■□□ 2.05
NINLQ9Y2I6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
NINLQ9Y2I6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC27.83■■■□□ 2.05
NINLQ9Y2I6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC27.83■■■□□ 2.05
NINLQ9Y2I6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
NINLQ9Y2I6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
NINLQ9Y2I6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC27.83■■■□□ 2.05
NINLQ9Y2I6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC27.83■■■□□ 2.05
NINLQ9Y2I6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC27.83■■■□□ 2.05
NINLQ9Y2I6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
NINLQ9Y2I6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC27.83■■■□□ 2.05
NINLQ9Y2I6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC27.83■■■□□ 2.05
NINLQ9Y2I6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC27.83■■■□□ 2.05
NINLQ9Y2I6 AC008550.1-201ENST00000511500 884 ntBASIC27.83■■■□□ 2.05
NINLQ9Y2I6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC27.83■■■□□ 2.05
NINLQ9Y2I6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
NINLQ9Y2I6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
NINLQ9Y2I6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC27.82■■■□□ 2.04
NINLQ9Y2I6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
NINLQ9Y2I6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC27.82■■■□□ 2.04
NINLQ9Y2I6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC27.82■■■□□ 2.04
NINLQ9Y2I6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
NINLQ9Y2I6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC27.82■■■□□ 2.04
NINLQ9Y2I6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
NINLQ9Y2I6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC27.82■■■□□ 2.04
NINLQ9Y2I6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
NINLQ9Y2I6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC27.82■■■□□ 2.04
NINLQ9Y2I6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC27.82■■■□□ 2.04
NINLQ9Y2I6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
NINLQ9Y2I6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
NINLQ9Y2I6 AC006557.6-201ENST00000623071 864 ntBASIC27.82■■■□□ 2.04
NINLQ9Y2I6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC27.82■■■□□ 2.04
NINLQ9Y2I6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 PLK5-205ENST00000642079 1969 ntBASIC27.81■■■□□ 2.04
NINLQ9Y2I6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
NINLQ9Y2I6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
NINLQ9Y2I6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
NINLQ9Y2I6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC27.8■■■□□ 2.04
NINLQ9Y2I6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
NINLQ9Y2I6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC27.8■■■□□ 2.04
NINLQ9Y2I6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
NINLQ9Y2I6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
NINLQ9Y2I6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC27.79■■■□□ 2.04
NINLQ9Y2I6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC27.79■■■□□ 2.04
NINLQ9Y2I6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC27.79■■■□□ 2.04
NINLQ9Y2I6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
NINLQ9Y2I6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC27.79■■■□□ 2.04
NINLQ9Y2I6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC27.79■■■□□ 2.04
NINLQ9Y2I6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC27.79■■■□□ 2.04
NINLQ9Y2I6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC27.79■■■□□ 2.04
NINLQ9Y2I6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
NINLQ9Y2I6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
NINLQ9Y2I6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC27.78■■■□□ 2.04
NINLQ9Y2I6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
NINLQ9Y2I6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
NINLQ9Y2I6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC27.78■■■□□ 2.04
NINLQ9Y2I6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC27.78■■■□□ 2.04
NINLQ9Y2I6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
NINLQ9Y2I6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC27.78■■■□□ 2.04
NINLQ9Y2I6 AC124016.1-201ENST00000609552 612 ntBASIC27.78■■■□□ 2.04
NINLQ9Y2I6 FAM197Y4-202ENST00000622692 608 ntBASIC27.78■■■□□ 2.04
NINLQ9Y2I6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms