Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGB4Q9UN71 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB4Q9UN71 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHGB4Q9UN71 MIR6084-201ENST00000622012 110 ntBASIC19.58■□□□□ 0.72
PCDHGB4Q9UN71 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB4Q9UN71 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PCDHGB4Q9UN71 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHGB4Q9UN71 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB4Q9UN71 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHGB4Q9UN71 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB4Q9UN71 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB4Q9UN71 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB4Q9UN71 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGB4Q9UN71 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB4Q9UN71 AC018445.3-201ENST00000624177 1945 ntBASIC19.57■□□□□ 0.72
PCDHGB4Q9UN71 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB4Q9UN71 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB4Q9UN71 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB4Q9UN71 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHGB4Q9UN71 AC005837.3-201ENST00000612163 286 ntBASIC19.57■□□□□ 0.72
PCDHGB4Q9UN71 AC120498.10-201ENST00000621827 505 ntBASIC19.57■□□□□ 0.72
PCDHGB4Q9UN71 AC007225.1-201ENST00000566331 1836 ntBASIC19.57■□□□□ 0.72
PCDHGB4Q9UN71 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGB4Q9UN71 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
PCDHGB4Q9UN71 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB4Q9UN71 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDHGB4Q9UN71 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB4Q9UN71 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 AC011484.1-201ENST00000377652 1995 ntBASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGB4Q9UN71 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 AC105265.2-201ENST00000467189 838 ntBASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGB4Q9UN71 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 AC116562.4-201ENST00000641316 2276 ntBASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 FP700111.2-201ENST00000619190 1892 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms