Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.25■□□□□ 0.99
DNMT3BQ9UBC3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
DNMT3BQ9UBC3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.25■□□□□ 0.99
DNMT3BQ9UBC3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.25■□□□□ 0.99
DNMT3BQ9UBC3 AL049637.2-201ENST00000641778 930 ntBASIC21.25■□□□□ 0.99
DNMT3BQ9UBC3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DNMT3BQ9UBC3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.25■□□□□ 0.99
DNMT3BQ9UBC3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.25■□□□□ 0.99
DNMT3BQ9UBC3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
DNMT3BQ9UBC3 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.25■□□□□ 0.99
DNMT3BQ9UBC3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DNMT3BQ9UBC3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.23■□□□□ 0.99
DNMT3BQ9UBC3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT3BQ9UBC3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT3BQ9UBC3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT3BQ9UBC3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.22■□□□□ 0.99
DNMT3BQ9UBC3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
DNMT3BQ9UBC3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.22■□□□□ 0.99
DNMT3BQ9UBC3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.22■□□□□ 0.99
DNMT3BQ9UBC3 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.22■□□□□ 0.99
DNMT3BQ9UBC3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.22■□□□□ 0.99
DNMT3BQ9UBC3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.22■□□□□ 0.99
DNMT3BQ9UBC3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.22■□□□□ 0.99
DNMT3BQ9UBC3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.22■□□□□ 0.99
DNMT3BQ9UBC3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.22■□□□□ 0.99
DNMT3BQ9UBC3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DNMT3BQ9UBC3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 BX088651.1-201ENST00000540551 451 ntBASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 KRT17P2-201ENST00000300992 1314 ntBASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 Z98882.1-201ENST00000622160 2253 ntBASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DNMT3BQ9UBC3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 LINC00565-201ENST00000562710 2331 ntBASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 AP001412.1-201ENST00000608405 714 ntBASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 AC113410.3-201ENST00000623366 203 ntBASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 AL135905.2-201ENST00000584934 1404 ntBASIC21.2■□□□□ 0.98
DNMT3BQ9UBC3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms