Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LMCD1Q9NZU5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.74■■□□□ 1.07
LMCD1Q9NZU5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.74■■□□□ 1.07
LMCD1Q9NZU5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.74■■□□□ 1.07
LMCD1Q9NZU5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.74■■□□□ 1.07
LMCD1Q9NZU5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.74■■□□□ 1.07
LMCD1Q9NZU5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
LMCD1Q9NZU5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.74■■□□□ 1.07
LMCD1Q9NZU5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.74■■□□□ 1.07
LMCD1Q9NZU5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LMCD1Q9NZU5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LMCD1Q9NZU5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMCD1Q9NZU5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMCD1Q9NZU5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMCD1Q9NZU5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.73■■□□□ 1.07
LMCD1Q9NZU5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LMCD1Q9NZU5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMCD1Q9NZU5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.73■■□□□ 1.07
LMCD1Q9NZU5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LMCD1Q9NZU5 KRT16P5-201ENST00000455284 522 ntBASIC21.73■■□□□ 1.07
LMCD1Q9NZU5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.73■■□□□ 1.07
LMCD1Q9NZU5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.73■■□□□ 1.07
LMCD1Q9NZU5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMCD1Q9NZU5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMCD1Q9NZU5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 HTR7P1-201ENST00000538670 1336 ntBASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 C1orf229-201ENST00000623686 2258 ntBASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMCD1Q9NZU5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 AC113347.1-201ENST00000413321 391 ntBASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 AC092053.2-201ENST00000640557 1818 ntBASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LMCD1Q9NZU5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.7■■□□□ 1.07
LMCD1Q9NZU5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LMCD1Q9NZU5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LMCD1Q9NZU5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 AC073195.1-201ENST00000607241 877 ntBASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 AL121829.2-201ENST00000620908 328 ntBASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.69■■□□□ 1.06
LMCD1Q9NZU5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms