Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.57■□□□□ 0.72
NDE1Q9NXR1 DUX4L19-201ENST00000557448 1267 ntBASIC19.57■□□□□ 0.72
NDE1Q9NXR1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDE1Q9NXR1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NDE1Q9NXR1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDE1Q9NXR1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.57■□□□□ 0.72
NDE1Q9NXR1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NDE1Q9NXR1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 KRT16P3-201ENST00000439127 1283 ntBASIC19.56■□□□□ 0.72
NDE1Q9NXR1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.56■□□□□ 0.72
NDE1Q9NXR1 NEFHP1-201ENST00000412845 2629 ntBASIC19.55■□□□□ 0.72
NDE1Q9NXR1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NDE1Q9NXR1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.55■□□□□ 0.72
NDE1Q9NXR1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NDE1Q9NXR1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NDE1Q9NXR1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NDE1Q9NXR1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.55■□□□□ 0.72
NDE1Q9NXR1 AC011298.3-201ENST00000615796 283 ntBASIC19.55■□□□□ 0.72
NDE1Q9NXR1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.55■□□□□ 0.72
NDE1Q9NXR1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NDE1Q9NXR1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NDE1Q9NXR1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 AP004607.4-201ENST00000530158 1459 ntBASIC19.54■□□□□ 0.72
NDE1Q9NXR1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.54■□□□□ 0.72
NDE1Q9NXR1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.54■□□□□ 0.72
NDE1Q9NXR1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDE1Q9NXR1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NDE1Q9NXR1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDE1Q9NXR1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NDE1Q9NXR1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NDE1Q9NXR1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.53■□□□□ 0.72
NDE1Q9NXR1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.53■□□□□ 0.72
NDE1Q9NXR1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NDE1Q9NXR1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDE1Q9NXR1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NDE1Q9NXR1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDE1Q9NXR1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDE1Q9NXR1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NDE1Q9NXR1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDE1Q9NXR1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDE1Q9NXR1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 SERBP1P1-201ENST00000396021 1160 ntBASIC19.52■□□□□ 0.72
NDE1Q9NXR1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 MIR3621-201ENST00000580529 85 ntBASIC19.52■□□□□ 0.72
NDE1Q9NXR1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 AC005332.7-201ENST00000614046 2005 ntBASIC19.52■□□□□ 0.72
NDE1Q9NXR1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDE1Q9NXR1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms