Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 AP000525.1-201ENST00000608286 694 ntBASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 NBPF21P-201ENST00000425093 1451 ntBASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 CYP2D8P-201ENST00000433633 1490 ntBASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 GOLGA2P6-201ENST00000340929 2049 ntBASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC10.6□□□□□ -0.71
KRTAP4-1Q9BYQ7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 ARMC10P1-201ENST00000313754 855 ntBASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 AC005521.1-201ENST00000393351 872 ntBASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 PGM5P4-201ENST00000421970 445 ntBASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 AL390955.1-201ENST00000428694 934 ntBASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 KRT16P5-201ENST00000455284 522 ntBASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 REXO1L10P-201ENST00000615707 1290 ntBASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 AL121829.2-201ENST00000620908 328 ntBASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
KRTAP4-1Q9BYQ7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 AC242852.2-201ENST00000615738 1807 ntBASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 GUSBP5-202ENST00000510805 1989 ntBASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 KRT18P57-201ENST00000443599 1254 ntBASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 DUT-205ENST00000558813 769 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-1Q9BYQ7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP4-1Q9BYQ7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC10.57□□□□□ -0.72
KRTAP4-1Q9BYQ7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC10.57□□□□□ -0.72
KRTAP4-1Q9BYQ7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP4-1Q9BYQ7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP4-1Q9BYQ7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP4-1Q9BYQ7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP4-1Q9BYQ7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC10.57□□□□□ -0.72
KRTAP4-1Q9BYQ7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC10.57□□□□□ -0.72
KRTAP4-1Q9BYQ7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms