Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
SCAPERQ9BY12 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SCAPERQ9BY12 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
SCAPERQ9BY12 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
SCAPERQ9BY12 WWOX-216ENST00000569818 525 ntBASIC30.7■■■□□ 2.5
SCAPERQ9BY12 AC004264.1-201ENST00000608354 794 ntBASIC30.7■■■□□ 2.5
SCAPERQ9BY12 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC30.69■■■□□ 2.5
SCAPERQ9BY12 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAPERQ9BY12 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAPERQ9BY12 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAPERQ9BY12 NIFKP9-201ENST00000419265 221 ntBASIC30.69■■■□□ 2.5
SCAPERQ9BY12 AC010203.1-204ENST00000548782 407 ntBASIC30.69■■■□□ 2.5
SCAPERQ9BY12 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC30.69■■■□□ 2.5
SCAPERQ9BY12 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC30.69■■■□□ 2.5
SCAPERQ9BY12 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC30.69■■■□□ 2.5
SCAPERQ9BY12 AC006011.2-201ENST00000621313 1158 ntBASIC30.69■■■□□ 2.5
SCAPERQ9BY12 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC30.69■■■□□ 2.5
SCAPERQ9BY12 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAPERQ9BY12 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SCAPERQ9BY12 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC30.69■■■□□ 2.5
SCAPERQ9BY12 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SCAPERQ9BY12 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
SCAPERQ9BY12 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
SCAPERQ9BY12 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
SCAPERQ9BY12 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC30.68■■■□□ 2.5
SCAPERQ9BY12 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SCAPERQ9BY12 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SCAPERQ9BY12 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC30.68■■■□□ 2.5
SCAPERQ9BY12 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC30.68■■■□□ 2.5
SCAPERQ9BY12 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SCAPERQ9BY12 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SCAPERQ9BY12 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC30.67■■■□□ 2.5
SCAPERQ9BY12 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SCAPERQ9BY12 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC30.67■■■□□ 2.5
SCAPERQ9BY12 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SCAPERQ9BY12 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC30.67■■■□□ 2.5
SCAPERQ9BY12 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC30.67■■■□□ 2.5
SCAPERQ9BY12 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SCAPERQ9BY12 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SCAPERQ9BY12 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SCAPERQ9BY12 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC30.67■■■□□ 2.5
SCAPERQ9BY12 MFF-203ENST00000349901 1716 ntTSL 2 BASIC30.67■■■□□ 2.5
SCAPERQ9BY12 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SCAPERQ9BY12 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SCAPERQ9BY12 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SCAPERQ9BY12 KSR1P1-201ENST00000446298 240 ntBASIC30.65■■■□□ 2.5
SCAPERQ9BY12 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SCAPERQ9BY12 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC30.65■■■□□ 2.5
SCAPERQ9BY12 LTBR-211ENST00000543190 785 ntTSL 3 BASIC30.65■■■□□ 2.5
SCAPERQ9BY12 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
SCAPERQ9BY12 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC30.65■■■□□ 2.5
SCAPERQ9BY12 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
SCAPERQ9BY12 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
SCAPERQ9BY12 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SCAPERQ9BY12 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC30.65■■■□□ 2.5
SCAPERQ9BY12 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SCAPERQ9BY12 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC30.65■■■□□ 2.5
SCAPERQ9BY12 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
SCAPERQ9BY12 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SCAPERQ9BY12 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SCAPERQ9BY12 AC087388.1-201ENST00000571370 1112 ntBASIC30.64■■■□□ 2.5
SCAPERQ9BY12 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SCAPERQ9BY12 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC30.64■■■□□ 2.5
SCAPERQ9BY12 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SCAPERQ9BY12 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC30.64■■■□□ 2.49
SCAPERQ9BY12 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.64■■■□□ 2.49
SCAPERQ9BY12 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC30.64■■■□□ 2.49
SCAPERQ9BY12 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC30.64■■■□□ 2.49
SCAPERQ9BY12 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.64■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms