Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VAMP8Q9BV40 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 PRORSD1P-202ENST00000563365 2154 ntBASIC14.9□□□□□ -0.02
VAMP8Q9BV40 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 AC131274.2-201ENST00000580697 1507 ntBASIC14.9□□□□□ -0.02
VAMP8Q9BV40 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VAMP8Q9BV40 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC14.89□□□□□ -0.03
VAMP8Q9BV40 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 AC139713.2-201ENST00000641328 2723 ntBASIC14.89□□□□□ -0.03
VAMP8Q9BV40 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 CROCCP1-201ENST00000426910 5675 ntBASIC14.89□□□□□ -0.03
VAMP8Q9BV40 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VAMP8Q9BV40 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
VAMP8Q9BV40 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VAMP8Q9BV40 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VAMP8Q9BV40 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VAMP8Q9BV40 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VAMP8Q9BV40 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VAMP8Q9BV40 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VAMP8Q9BV40 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.87□□□□□ -0.03
VAMP8Q9BV40 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VAMP8Q9BV40 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VAMP8Q9BV40 CHST11-203ENST00000547956 936 ntTSL 2 BASIC14.87□□□□□ -0.03
VAMP8Q9BV40 MIR3960-201ENST00000583311 91 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms