Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ABCA3Q99758 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ABCA3Q99758 KRT18P22-201ENST00000402024 1347 ntBASIC27.29■■□□□ 1.96
ABCA3Q99758 AP002982.1-201ENST00000492365 877 ntBASIC27.29■■□□□ 1.96
ABCA3Q99758 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ABCA3Q99758 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC27.29■■□□□ 1.96
ABCA3Q99758 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ABCA3Q99758 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
ABCA3Q99758 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ABCA3Q99758 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ABCA3Q99758 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ABCA3Q99758 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC27.28■■□□□ 1.96
ABCA3Q99758 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
ABCA3Q99758 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ABCA3Q99758 PNN-205ENST00000556530 601 ntTSL 2 BASIC27.28■■□□□ 1.96
ABCA3Q99758 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ABCA3Q99758 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ABCA3Q99758 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ABCA3Q99758 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ABCA3Q99758 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC27.27■■□□□ 1.96
ABCA3Q99758 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ABCA3Q99758 TMA16-209ENST00000513272 803 ntTSL 2 BASIC27.27■■□□□ 1.96
ABCA3Q99758 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC27.27■■□□□ 1.96
ABCA3Q99758 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC27.27■■□□□ 1.96
ABCA3Q99758 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
ABCA3Q99758 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC27.27■■□□□ 1.96
ABCA3Q99758 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
ABCA3Q99758 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC27.27■■□□□ 1.96
ABCA3Q99758 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
ABCA3Q99758 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
ABCA3Q99758 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC27.26■■□□□ 1.96
ABCA3Q99758 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ABCA3Q99758 KSR1P1-201ENST00000446298 240 ntBASIC27.26■■□□□ 1.95
ABCA3Q99758 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ABCA3Q99758 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
ABCA3Q99758 C1QL1P1-201ENST00000568105 661 ntBASIC27.26■■□□□ 1.95
ABCA3Q99758 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ABCA3Q99758 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCA3Q99758 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCA3Q99758 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCA3Q99758 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ABCA3Q99758 AC104076.2-201ENST00000448912 469 ntBASIC27.25■■□□□ 1.95
ABCA3Q99758 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC27.25■■□□□ 1.95
ABCA3Q99758 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC27.25■■□□□ 1.95
ABCA3Q99758 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC27.25■■□□□ 1.95
ABCA3Q99758 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ABCA3Q99758 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
ABCA3Q99758 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC27.24■■□□□ 1.95
ABCA3Q99758 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ABCA3Q99758 C2orf69P3-201ENST00000565542 1120 ntBASIC27.24■■□□□ 1.95
ABCA3Q99758 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC27.24■■□□□ 1.95
ABCA3Q99758 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ABCA3Q99758 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC27.24■■□□□ 1.95
ABCA3Q99758 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ABCA3Q99758 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
ABCA3Q99758 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
ABCA3Q99758 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
ABCA3Q99758 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC27.24■■□□□ 1.95
ABCA3Q99758 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
ABCA3Q99758 CRYGFP-201ENST00000418459 633 ntBASIC27.24■■□□□ 1.95
ABCA3Q99758 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC27.24■■□□□ 1.95
ABCA3Q99758 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC27.24■■□□□ 1.95
ABCA3Q99758 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC27.24■■□□□ 1.95
ABCA3Q99758 AC026271.3-201ENST00000571884 352 ntBASIC27.24■■□□□ 1.95
ABCA3Q99758 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ABCA3Q99758 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC27.24■■□□□ 1.95
ABCA3Q99758 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
ABCA3Q99758 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC27.24■■□□□ 1.95
ABCA3Q99758 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ABCA3Q99758 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ABCA3Q99758 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
ABCA3Q99758 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC27.23■■□□□ 1.95
ABCA3Q99758 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC27.23■■□□□ 1.95
ABCA3Q99758 NMU-205ENST00000511469 756 ntTSL 3 BASIC27.23■■□□□ 1.95
ABCA3Q99758 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ABCA3Q99758 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC27.23■■□□□ 1.95
ABCA3Q99758 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
ABCA3Q99758 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ABCA3Q99758 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC27.23■■□□□ 1.95
ABCA3Q99758 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
ABCA3Q99758 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ABCA3Q99758 AC087388.1-201ENST00000571370 1112 ntBASIC27.22■■□□□ 1.95
ABCA3Q99758 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
ABCA3Q99758 AC004264.1-201ENST00000608354 794 ntBASIC27.22■■□□□ 1.95
ABCA3Q99758 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC27.22■■□□□ 1.95
ABCA3Q99758 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ABCA3Q99758 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC27.22■■□□□ 1.95
ABCA3Q99758 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ABCA3Q99758 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
ABCA3Q99758 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ABCA3Q99758 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC27.22■■□□□ 1.95
ABCA3Q99758 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA3Q99758 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC27.21■■□□□ 1.95
ABCA3Q99758 AL137013.1-201ENST00000432946 1228 ntBASIC27.21■■□□□ 1.95
ABCA3Q99758 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA3Q99758 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC27.21■■□□□ 1.95
ABCA3Q99758 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
ABCA3Q99758 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA3Q99758 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA3Q99758 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms