Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLPTM1LQ96KA5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 AC120498.9-201ENST00000339021 3867 ntBASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.43■□□□□ 0.7
CLPTM1LQ96KA5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.42■□□□□ 0.7
CLPTM1LQ96KA5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 AC005082.1-201ENST00000413042 2259 ntBASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1LQ96KA5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 TMEM179-206ENST00000616017 1645 ntBASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLPTM1LQ96KA5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.39■□□□□ 0.7
CLPTM1LQ96KA5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLPTM1LQ96KA5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CLPTM1LQ96KA5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLPTM1LQ96KA5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLPTM1LQ96KA5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.39■□□□□ 0.69
CLPTM1LQ96KA5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.39■□□□□ 0.69
CLPTM1LQ96KA5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLPTM1LQ96KA5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CLPTM1LQ96KA5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLPTM1LQ96KA5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLPTM1LQ96KA5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms